RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FAM168AQ92567 244 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZBTB8AQ96BR9 441 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 CDK5RAP3Q96JB5 506 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 CLPTM1LQ96KA5 538 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 UIMC1Q96RL1 719 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 RTEL1Q9NZ71 1219 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 STAP2Q9UGK3 403 aa5.95□□□□□ -1.46
HMGB3P31-201ENST00000413333 A0A1W2PR48 441 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 DAPK3O43293 454 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 MGEA5O60502 916 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 ADAM23O75077 832 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 GAAP10253 952 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 SYN1P17600 705 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 IL12RB1P42701 662 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 EPHB3P54753 998 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 UBE3CQ15386 1083 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 SWSAP1Q6NVH7 229 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 C1orf228Q6PIY5 440 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 PRR23BQ6ZRT6 265 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 TOGARAM2Q6ZUX3 1019 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 CBLL1Q75N03 491 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 MAEAQ7L5Y9 396 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 RSPH3Q86UC2 560 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 SH2D3CQ8N5H7 860 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 TTLL6Q8N841 843 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 PIK3C3Q8NEB9 887 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 CCHCR1Q8TD31 782 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 NT5C1BQ96P26 610 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 UHRF1Q96T88 793 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 OSBPL6Q9BZF3 934 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 MCOLN1Q9GZU1 580 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 EPB41L4BQ9H329 900 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 DCP1AQ9NPI6 582 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 PLCB1Q9NQ66 1216 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 TDP1Q9NUW8 608 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 FBXO10Q9UK96 956 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 DMTF1Q9Y222 760 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 PCDHA3Q9Y5H8 950 aa5.94□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZNF503-AS2A6NEH8 195 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 H3BUI4 141 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 SLC16A6O15403 523 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 PHF2O75151 1096 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 CYP7B1O75881 506 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 ENDOD1O94919 500 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 KNG1P01042 644 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 FOSP01100 380 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 ECHS1P30084 290 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 ALDH5A1P51649 535 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 MLLT6P55198 1093 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 MEF2AQ02078 507 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 NOGQ13253 232 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 IFIT5Q13325 482 aaKnown RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZRSR2Q15696 482 aaKnown RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 GRAMD1BQ3KR37 738 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 KHDC1Q4VXA5 237 aaKnown RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 XRRA1Q6P2D8 792 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 IGDCC3Q8IVU1 814 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 RTKN2Q8IZC4 609 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 C3orf20Q8ND61 904 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 PLBD2Q8NHP8 589 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 NSUN6Q8TEA1 469 aaKnown RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 SNX33Q8WV41 574 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 VRK1Q99986 396 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 LDAHQ9H6V9 325 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 MANSC1Q9H8J5 431 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 PPCSQ9HAB8 311 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 PTPRHQ9HD43 1115 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 TLR9Q9NR96 1032 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 LMBRD1Q9NUN5 540 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 FNIP2Q9P278 1114 aa5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.93□□□□□ -1.46
HMGB3P31-201ENST00000413333 TEX51A0A1B0GUA7 166 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 SGTAO43765 313 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 PEX10O60683 326 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 PAPLNO95428 1278 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 HMGCRP04035 888 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 IGFBP6P24592 240 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 SLC6A9P48067 706 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 HK3P52790 923 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 RAB1AP62820 205 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 GPSM2P81274 684 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 CHAF1AQ13111 956 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 TARDBPQ13148 414 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 FGL2Q14314 439 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 Q6ZVL8 140 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 IFNL2Q8IZJ0 200 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 PQLC1Q8N2U9 271 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 NKD2Q969F2 451 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 CCDC138Q96M89 665 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 NUP62CLQ9H1M0 184 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 ABCF2Q9UG63 623 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 FAM184BQ9ULE4 1060 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 SIK3Q9Y2K2 1263 aa5.92□□□□□ -1.46
HMGB3P31-201ENST00000413333 A0A088AWK7 358 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms