RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CNTNAP2Q9UHC6 1331 aa7.26□□□□□ -1.25
VPS41-204ENST00000413141 A0A0B4J269 797 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 GOLGA8IPA6NC78 632 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 MOXD2PA6NHM9 499 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 GOLGA8JA6NMD2 632 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TTLL13PA6NNM8 815 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 ACKR2O00590 384 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 ABLIM1O14639 778 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 KIAA0391O15091 583 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 B4GALT5O43286 388 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 MFAP3LO75121 409 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 GPR32O75388 356 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TOM1L1O75674 476 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 CABYRO75952 493 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 AFPP02771 609 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 IQCF3P0C7M6 154 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TRIM49P0CI25 452 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TRIM49CP0CI26 452 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 GNAT1P11488 350 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 PROZP22891 400 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 SFPQP23246 707 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS41-204ENST00000413141 KLK7P49862 253 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 NLRP11P59045 1033 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 MCCD1P59942 119 aaPredicted RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 ZNF200P98182 395 aaPredicted RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 KCNH2Q12809 1159 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 LRMPQ12912 555 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 PRPF4BQ13523 1007 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 SNRNP35Q16560 246 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 AMHR2Q16671 573 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 FAM187BQ17R55 369 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 KIZQ2M2Z5 673 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 NBPF20Q3BBV1 942 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TCERG1LQ5VWI1 586 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 SLFN12LQ6IEE8 588 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TAF2Q6P1X5 1199 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 TSHZ1Q6ZSZ6 1077 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 SESTD1Q86VW0 696 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 CBWD2Q8IUF1 395 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 LRRC8AQ8IWT6 810 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 GPD1LQ8N335 351 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 PLEKHO2Q8TD55 490 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 SH3TC2Q8TF17 1288 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 CACTINQ8WUQ7 758 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 PRIMPOLQ96LW4 560 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 SCLT1Q96NL6 688 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 ACO2Q99798 780 aaKnown RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 TTYH3Q9C0H2 523 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 HAPLN2Q9GZV7 340 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS41-204ENST00000413141 ADAMTS10Q9H324 1103 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 HMX1Q9NP08 348 aaPredicted RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 PRMT7Q9NVM4 692 aaPredicted RBP7.25□□□□□ -1.25
VPS41-204ENST00000413141 SIK3Q9Y2K2 1263 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.25□□□□□ -1.252e-7■■□□□ 11.7
VPS41-204ENST00000413141 EVPLQ92817 2033 aa7.25□□□□□ -1.25
VPS41-204ENST00000413141 GTPBP10A4D1E9 387 aaKnown RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 AKR1B15C9JRZ8 316 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 EXTL3O43909 919 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 FAM189A1O60320 539 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 TSPAN1O60635 241 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 TPM1P09493 284 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 KRT13P13646 458 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 TRIM21P19474 475 aaKnown RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 CASP14P31944 242 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 FMO5P49326 533 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 FXR1P51114 621 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS41-204ENST00000413141 VAMP7P51809 220 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 ACLYP53396 1101 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 DLG4P78352 724 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 CCZ1BP86790 482 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 CCZ1P86791 482 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 CDC42EP1Q00587 391 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 MYL7Q01449 175 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 ENPEPQ07075 957 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 MCL1Q07820 350 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 CYP24A1Q07973 514 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 RBL2Q08999 1139 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 GOLGA8FQ08AF8 430 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 GOLGA8DPQ0D2H9 430 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 TMEM62Q0P6H9 643 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 KCNMA1Q12791 1236 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 HSP90AA2PQ14568 343 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 NOLC1Q14978 699 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS41-204ENST00000413141 ZNF568Q3ZCX4 644 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 FAM47CQ5HY64 1035 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 FIGNQ5HY92 759 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 C1orf220Q5T0J3 134 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 ATF7IP2Q5U623 682 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 GDF6Q6KF10 455 aaPredicted RBP7.24□□□□□ -1.25
VPS41-204ENST00000413141 MPZL3Q6UWV2 235 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 SRGAP1Q7Z6B7 1085 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 SERINC5Q86VE9 423 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 PPFIBP1Q86W92 1011 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 CNGA4Q8IV77 575 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 DNAJC5GQ8N7S2 189 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 TC2NQ8N9U0 490 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 RDH13Q8NBN7 331 aa7.24□□□□□ -1.25
VPS41-204ENST00000413141 DNAJB3Q8WWF6 145 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms