RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 ADRB2P07550 413 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 RPS6P62753 249 aaKnown RBP14.89□□□□□ -0.03
NUB1-201ENST00000413040 PPP2R2AP63151 447 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 SNX1Q13596 522 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 NOP9Q86U38 636 aaKnown RBP14.89□□□□□ -0.03
NUB1-201ENST00000413040 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.89□□□□□ -0.03
NUB1-201ENST00000413040 BICD1Q96G01 975 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 PI4K2AQ9BTU6 479 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 PNMA2Q9UL42 364 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 NFS1Q9Y697 457 aa14.89□□□□□ -0.03
NUB1-201ENST00000413040 UBE4BO95155 1302 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 CAND2O75155 1236 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 MRPS9P82933 396 aaKnown RBP14.88□□□□□ -0.03
NUB1-201ENST00000413040 KIF22Q14807 665 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 LMBRD2Q68DH5 695 aaPredicted RBP14.88□□□□□ -0.03
NUB1-201ENST00000413040 MICALCLQ6ZW33 695 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 CPLX4Q7Z7G2 160 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 FMNL3Q8IVF7 1028 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 PRPF38AQ8NAV1 312 aaKnown RBP14.88□□□□□ -0.03
NUB1-201ENST00000413040 RMDN3Q96TC7 470 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 NUP85Q9BW27 656 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 TCRBV7S2A1N4TA0A589 114 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 ANKRD63C9JTQ0 380 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 ICAM1P05362 532 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 SPP2Q13103 211 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 DENND2CQ68D51 928 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 CCDC137Q6PK04 289 aaKnown RBP14.88□□□□□ -0.03
NUB1-201ENST00000413040 POMGNT1Q8WZA1 660 aa14.88□□□□□ -0.03
NUB1-201ENST00000413040 DNAJC17Q9NVM6 304 aaKnown RBP14.88□□□□□ -0.03
NUB1-201ENST00000413040 DENND3A2RUS2 1198 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 VPS41P49754 854 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SNRNP35Q16560 246 aaKnown RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 NFIL3Q16649 462 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 ZNF564Q8TBZ8 553 aaPredicted RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 EPS8L1Q8TE68 723 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SEMA4DQ92854 862 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SYT11Q9BT88 431 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 AGO4Q9HCK5 861 aaKnown RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 GMNCA6NCL1 334 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 MEFVO15553 781 aaPredicted RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 PYGMP11217 842 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 FGFR4P22455 802 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SSTR3P32745 418 aaPredicted RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 GJC1P36383 396 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 PMS2P54278 862 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 BIRC3Q13489 604 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SLC9A9Q8IVB4 645 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 CABS1Q96KC9 395 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 KREMEN1Q96MU8 473 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 PHF20L1A8MW92 1017 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 PLSCR1O15162 318 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 RTN2O75298 545 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 CNGA1P29973 690 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SSR1P43307 286 aaKnown RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 SMTNP53814 917 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SLC29A2Q14542 456 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 RASA3Q14644 834 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 PPP1R7Q15435 360 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 ARHGEF16Q5VV41 709 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 NEK9Q8TD19 979 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 SYTL5Q8TDW5 730 aaPredicted RBP14.87□□□□□ -0.03
NUB1-201ENST00000413040 TAS1R2Q8TE23 839 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 C7orf43Q8WVR3 580 aa14.87□□□□□ -0.03
NUB1-201ENST00000413040 GOLGA6L7A0A1B0GV03 622 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 DHX15O43143 795 aaKnown RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 FAM107AO95990 144 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 HMGB2P26583 209 aaKnown RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 CDR1P51861 262 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 POU5F1Q01860 360 aaKnown RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 TRIP13Q15645 432 aaPredicted RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 ZFYVE27Q5T4F4 411 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 TAX1BP1Q86VP1 789 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 PRELID2Q8N945 189 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 ATP8B4Q8TF62 1192 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 CYFIP2Q96F07 1278 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 CEP170P1Q96L14 293 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 PSMD1Q99460 953 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 ZSWIM1Q9BR11 485 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 SEMA4AQ9H3S1 761 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 KMT5AQ9NQR1 393 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 SYNGAP1Q96PV0 1343 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 QSER1Q2KHR3 1735 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 VCAM1P19320 739 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 MUTP22033 750 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 PDE6CP51160 858 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 MFAP3P55082 362 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 C1orf220Q5T0J3 134 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 MCF2L2Q86YR7 1114 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 C1orf54Q8WWF1 131 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 KAT2BQ92831 832 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 TATDN2Q93075 761 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 NT5C1BQ96P26 610 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 PDGFDQ9GZP0 370 aaPredicted RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 MTRF1LQ9UGC7 380 aaKnown RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 DIS3Q9Y2L1 958 aaKnown RBP14.86□□□□□ -0.03
NUB1-201ENST00000413040 ZNF536O15090 1300 aa14.86□□□□□ -0.03
NUB1-201ENST00000413040 ASTN2O75129 1339 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms