RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 TMEM161BQ8NDZ6 487 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 NLRP7Q8WX94 980 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
PUDP-202ENST00000412827 ERGIC2Q96RQ1 377 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 INO80BQ9C086 356 aaPredicted RBP16.54■□□□□ 0.24
PUDP-202ENST00000412827 C2orf40Q9H1Z8 148 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 VPS16Q9H269 839 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 TAB2Q9NYJ8 693 aa16.54■□□□□ 0.24
PUDP-202ENST00000412827 ZMYM2Q9UBW7 1377 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 VTNP04004 478 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 NR3C1P04150 777 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 TPM1P09493 284 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 EPB41P11171 864 aaKnown RBP16.53■□□□□ 0.24
PUDP-202ENST00000412827 GPC3P51654 580 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 UBXN1Q04323 297 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 ENPEPQ07075 957 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 LAMTOR4Q0VGL1 99 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 TRIM71Q2Q1W2 868 aaKnown RBP16.53■□□□□ 0.24
PUDP-202ENST00000412827 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 ZC2HC1CQ53FD0 456 aaPredicted RBP16.53■□□□□ 0.24
PUDP-202ENST00000412827 FAM43BQ6ZT52 329 aaPredicted RBP16.53■□□□□ 0.24
PUDP-202ENST00000412827 MAP4K3Q8IVH8 894 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 ZBTB8OSQ8IWT0 167 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 LRRC8AQ8IWT6 810 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 USP38Q8NB14 1042 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 CCDC112Q8NEF3 446 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 PRPF31Q8WWY3 499 aaKnown RBP16.53■□□□□ 0.24
PUDP-202ENST00000412827 ZBTB10Q96DT7 871 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 CCDC51Q96ER9 411 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 GCOM2Q9BZD3 368 aaPredicted RBP16.53■□□□□ 0.24
PUDP-202ENST00000412827 PPP1R12CQ9BZL4 782 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 ARHGAP28Q9P2N2 729 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 SQORQ9Y6N5 450 aa16.53■□□□□ 0.24
PUDP-202ENST00000412827 LRRIQ4A6NIV6 560 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 CCDC169A6NNP5 214 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 KIAA0391O15091 583 aaKnown RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 TEX33O43247 280 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 CAPN15O75808 1086 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 TIMP1P01033 207 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
PUDP-202ENST00000412827 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 EFNA5P52803 228 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 CRYBB1P53674 252 aaPredicted RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 NLRP11P59045 1033 aaKnown RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 MCCD1P59942 119 aaPredicted RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 POU5F1BQ06416 359 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 PCBP1Q15365 356 aaKnown RBP eCLIP16.52■□□□□ 0.24
PUDP-202ENST00000412827 FIGNQ5HY92 759 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 FAM26DQ5JW98 314 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 TMEM199Q8N511 208 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 DEPTORQ8TB45 409 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 CELF4Q9BZC1 486 aaKnown RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 NDST4Q9H3R1 872 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 TMEM134Q9H6X4 195 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 ARMCX3Q9UH62 379 aaPredicted RBP16.52■□□□□ 0.24
PUDP-202ENST00000412827 TBX20Q9UMR3 447 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 GINS2Q9Y248 185 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 CDY2AQ9Y6F7 541 aa16.52■□□□□ 0.24
PUDP-202ENST00000412827 BRCA2P51587 3418 aa16.52■□□□□ 0.23
PUDP-202ENST00000412827 ESPNB1AK53 854 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 SLC16A4O15374 487 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 GLRA2P23416 452 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
PUDP-202ENST00000412827 RGS19P49795 217 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 TMEM62Q0P6H9 643 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
PUDP-202ENST00000412827 DRP2Q13474 957 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 KIZQ2M2Z5 673 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 MIIPQ5JXC2 388 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 ZNF618Q5T7W0 954 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 CREBRFQ8IUR6 639 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 RNF149Q8NC42 400 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 WNT8BQ93098 351 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 NFKBIZQ9BYH8 718 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 TANC1Q9C0D5 1861 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 SIP14410 1827 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 DENND3A2RUS2 1198 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 PFKMP08237 780 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 KCNJ6P48051 423 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 CAPSQ13938 189 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 SRGAP1Q7Z6B7 1085 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 CNGA4Q8IV77 575 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 ASAP3Q8TDY4 903 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 OSMRQ99650 979 aa16.51■□□□□ 0.23
PUDP-202ENST00000412827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
PUDP-202ENST00000412827 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
PUDP-202ENST00000412827 PIGRP01833 764 aa16.5■□□□□ 0.23
PUDP-202ENST00000412827 IQCF3P0C7M6 154 aa16.5■□□□□ 0.23
PUDP-202ENST00000412827 SRGAP2CP0DJJ0 459 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms