RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 STK32CQ86UX6 486 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 CDYL2Q8N8U2 506 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 KYQ8NBH2 561 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 SKA1Q96BD8 255 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 HIST1H2AHQ96KK5 128 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 CCDC138Q96M89 665 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 ACO2Q99798 780 aaKnown RBP5.46□□□□□ -1.54
BRCA1-204ENST00000412061 HIST1H2AJQ99878 128 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 SYT3Q9BQG1 590 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 NOL10Q9BSC4 688 aaKnown RBP5.46□□□□□ -1.54
BRCA1-204ENST00000412061 SGPP1Q9BX95 441 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 CSRNP2Q9H175 543 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 PRDM12Q9H4Q4 367 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 KCNK12Q9HB15 430 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 IFT122Q9HBG6 1241 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 KCND1Q9NSA2 647 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 TRMT13Q9NUP7 481 aaKnown RBP5.46□□□□□ -1.54
BRCA1-204ENST00000412061 PRSS50Q9UI38 385 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 USP18Q9UMW8 372 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 CDY2AQ9Y6F7 541 aa5.46□□□□□ -1.54
BRCA1-204ENST00000412061 NRP2O60462 931 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 NDUFS2O75306 463 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 AGR2O95994 175 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 ZBED1O96006 694 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CHGBP05060 677 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 C5AR1P21730 350 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 XPAP23025 273 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CCT5P48643 541 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 ADKP55263 362 aaKnown RBP5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CD83Q01151 205 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 ELF2Q15723 593 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 ANO4Q32M45 955 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 WDR72Q3MJ13 1102 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 JAKMIP3Q5VZ66 844 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 MBNL2Q5VZF2 373 aaKnown RBP5.45□□□□□ -1.54
BRCA1-204ENST00000412061 GRAMD4Q6IC98 578 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CCDC149Q6ZUS6 474 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 BMP8AQ7Z5Y6 402 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 LYSMD2Q8IV50 215 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 SLC41A1Q8IVJ1 513 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 MIER2Q8N344 545 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 LINC00482Q8N8I6 264 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CCDC89Q8N998 374 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 ZBTB34Q8NCN2 500 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 FAM156AQ8NDB6 213 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 OR5AN1Q8NGI8 311 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 GAB3Q8WWW8 586 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CCT6BQ92526 530 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 ZBTB8AQ96BR9 441 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 NOX5Q96PH1 765 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 TBCBQ99426 244 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 FAM204AQ9H8W3 233 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 GCM1Q9NP62 436 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 FBXO10Q9UK96 956 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 CROTQ9UKG9 612 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 SYNPO2Q9UMS6 1093 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 PCDHGB6Q9Y5F9 930 aa5.45□□□□□ -1.54
BRCA1-204ENST00000412061 TCERG1O14776 1098 aaKnown RBP5.44□□□□□ -1.54
BRCA1-204ENST00000412061 CUTAO60888 179 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 RNASEH2AO75792 299 aaKnown RBP5.44□□□□□ -1.54
BRCA1-204ENST00000412061 LIMS1P48059 325 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 DLG4P78352 724 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 CDK17Q00537 523 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 DGKDQ16760 1214 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 TUBB8Q3ZCM7 444 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 TSPEARQ8WU66 669 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 KCNN1Q92952 543 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 PGBD4Q96DM1 585 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 SGCZQ96LD1 299 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 SLC2A13Q96QE2 648 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 CRB3Q9BUF7 120 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 ACE2Q9BYF1 805 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-204ENST00000412061 RSAD1Q9HA92 442 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 SAGE1Q9NXZ1 904 aa5.44□□□□□ -1.54
BRCA1-204ENST00000412061 H0Y858 1186 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 CELA3BP08861 270 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 TNFAIP3P21580 790 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 TM4SF4P48230 202 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 SLC16A1P53985 500 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 NRG3P56975 720 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 DDX10Q13206 875 aaKnown RBP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 SMAD4Q13485 552 aaKnown RBP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 RTP5Q14D33 572 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 PDCD2Q16342 344 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 KIAA0753Q2KHM9 967 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 ATAT1Q5SQI0 421 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 LDHAL6AQ6ZMR3 332 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 GRAMD1CQ8IYS0 662 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 FATE1Q969F0 183 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 SIGLEC10Q96LC7 697 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 FAM193BQ96PV7 902 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 POLR3BQ9NW08 1133 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 TUBD1Q9UJT1 453 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 FBXO2Q9UK22 296 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-204ENST00000412061 PMF1-BGLAPU3KQ54 211 aa5.43□□□□□ -1.54
BRCA1-204ENST00000412061 A0A0G2JNJ9 132 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms