RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
ATRIP-204ENST00000412052 CCDC113Q9H0I3 377 aa15.34■□□□□ 0.05
ATRIP-204ENST00000412052 PHF2O75151 1096 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 PEX5P50542 639 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 UGCGQ16739 394 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 ANKRD20A8PQ5CZ79 823 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 CBWD2Q8IUF1 395 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 CACNA2D3Q8IZS8 1091 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 MASTLQ96GX5 879 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 CCDC114Q96M63 670 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 TMEM117Q9H0C3 514 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 TMX4Q9H1E5 349 aaPredicted RBP15.33■□□□□ 0.05
ATRIP-204ENST00000412052 DBR1Q9UK59 544 aaKnown RBP15.33■□□□□ 0.05
ATRIP-204ENST00000412052 TRPC6Q9Y210 931 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 PCDHA3Q9Y5H8 950 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 STK24Q9Y6E0 443 aa15.33■□□□□ 0.05
ATRIP-204ENST00000412052 NFIBO00712 420 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 SLC16A4O15374 487 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 PAEPP09466 180 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 DLATP10515 647 aaKnown RBP15.33■□□□□ 0.04
ATRIP-204ENST00000412052 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 B3GNT9Q6UX72 402 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 OTUD6AQ7L8S5 288 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 LDHDQ86WU2 507 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 DDX23Q9BUQ8 820 aaKnown RBP15.33■□□□□ 0.04
ATRIP-204ENST00000412052 HSPBP1Q9NZL4 362 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 SEL1LQ9UBV2 794 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 ODF2LQ9ULJ1 636 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 ZHX2Q9Y6X8 837 aa15.33■□□□□ 0.04
ATRIP-204ENST00000412052 YDJCA8MPS7 323 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 BCRP11274 1271 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 CREB1P16220 341 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 SOX10P56693 466 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 SNX1Q13596 522 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 HOMER2Q9NSB8 354 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 GGT7Q9UJ14 662 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 NOCTQ9UK39 431 aaKnown RBP15.32■□□□□ 0.04
ATRIP-204ENST00000412052 SERPINA10Q9UK55 444 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 RARAP10276 462 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 GPC5P78333 572 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 SLC27A3Q5K4L6 730 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 PLA2G4FQ68DD2 849 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 MIER3Q7Z3K6 550 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 C1orf54Q8WWF1 131 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 ATXN2LQ8WWM7 1075 aaKnown RBP15.32■□□□□ 0.04
ATRIP-204ENST00000412052 NUP85Q9BW27 656 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 FAM129AQ9BZQ8 928 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 MLXIPLQ9NP71 852 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 KCNH7Q9NS40 1196 aa15.32■□□□□ 0.04
ATRIP-204ENST00000412052 RASSF9O75901 435 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 LRRC14Q15048 493 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 TRIP13Q15645 432 aaPredicted RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 RHOT2Q8IXI1 618 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 CCDC105Q8IYK2 499 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 LRRC34Q8IZ02 419 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 ATG4AQ8WYN0 398 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 CHMP6Q96FZ7 201 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 PWWP2AQ96N64 755 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 FAM118BQ9BPY3 351 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 HERPUD2Q9BSE4 406 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 KLC4Q9NSK0 619 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 TMX2Q9Y320 296 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 ZNFX1Q9P2E3 1918 aaKnown RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 ATRNL1Q5VV63 1379 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 FAM187AA6NFU0 413 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 CLDN3O15551 220 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 SPOPO43791 374 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 NUDT17P0C025 328 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 SCTRP47872 440 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 MXI1P50539 228 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 PEX3P56589 373 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 FMO1Q01740 532 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 DHX34Q14147 1143 aaKnown RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 SIX1Q15475 284 aaPredicted RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 STXBP4Q6ZWJ1 553 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 MGARPQ8TDB4 240 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 ZNF317Q96PQ6 595 aaPredicted RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
ATRIP-204ENST00000412052 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 SYNGAP1Q96PV0 1343 aa15.31■□□□□ 0.04
ATRIP-204ENST00000412052 RGS16O15492 202 aaPredicted RBP15.3■□□□□ 0.04
ATRIP-204ENST00000412052 CTNNA2P26232 953 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 RARRES1P49788 294 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 GKAP1Q5VSY0 366 aaPredicted RBP15.3■□□□□ 0.04
ATRIP-204ENST00000412052 C11orf63Q6NUN7 778 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 UBL4BQ8N7F7 174 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 ZNF564Q8TBZ8 553 aaPredicted RBP15.3■□□□□ 0.04
ATRIP-204ENST00000412052 CD101Q93033 1021 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 ZNF653Q96CK0 615 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 NAP1L3Q99457 506 aaPredicted RBP15.3■□□□□ 0.04
ATRIP-204ENST00000412052 CTNNAL1Q9UBT7 734 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 UBE4BO95155 1302 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 ACSL3O95573 720 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 CCDC172P0C7W6 258 aa15.3■□□□□ 0.04
ATRIP-204ENST00000412052 ADSSP30520 456 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms