RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 TICRRQ7Z2Z1 1910 aa6.76□□□□□ -1.33
HMGN1P20-201ENST00000411849 CNTNAP5Q8WYK1 1306 aa6.76□□□□□ -1.33
HMGN1P20-201ENST00000411849 CNTNAP2Q9UHC6 1331 aa6.76□□□□□ -1.33
HMGN1P20-201ENST00000411849 COL4A3Q01955 1670 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 DCDC2BA2VCK2 349 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 MEIS3P2A8K0S8 358 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 NCAM2O15394 837 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 TEX28O15482 410 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 CSDE1O75534 798 aaKnown RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 RFPL2O75678 378 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 PAPLNO95428 1278 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 GLULP15104 373 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 SFNP31947 248 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 CLK2P49760 499 aaKnown RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 JAK3P52333 1124 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 PFKPQ01813 784 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 PRKCEQ02156 737 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 CREMQ03060 361 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 CSTF1Q05048 431 aaKnown RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 UBXN2BQ14CS0 331 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 TYW1BQ6NUM6 668 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 RSPO2Q6UXX9 243 aaPredicted RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 MTSS1LQ765P7 747 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 GET4Q7L5D6 327 aaPredicted RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 CATSPER4Q7RTX7 472 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 SGMS1Q86VZ5 419 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 MICU3Q86XE3 530 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZNF280BQ86YH2 543 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZBTB44Q8NCP5 570 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZNF707Q96C28 371 aaPredicted RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 NELL2Q99435 816 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 DDX23Q9BUQ8 820 aaKnown RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 HERC2P3Q9BVR0 1158 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 FAM126AQ9BYI3 521 aaPredicted RBP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 RSAD1Q9HA92 442 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 RXFP1Q9HBX9 757 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 DISC1Q9NRI5 854 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 BARHL2Q9NY43 387 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 RAB23Q9ULC3 237 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 PCDHB2Q9Y5E7 798 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 NUMBLQ9Y6R0 609 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 USP24Q9UPU5 2620 aa6.75□□□□□ -1.33
HMGN1P20-201ENST00000411849 NOTCH4Q99466 2003 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 A0A087WZ62 844 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 NRP1O14786 923 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 SGSM2O43147 1006 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 HRO43593 1189 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 GAS2O43903 313 aaKnown RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZNF862O60290 1169 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 B4GALT3O60512 393 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 LILRB5O75023 590 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 LRRN2O75325 713 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 NR1I2O75469 434 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 DDHD2O94830 711 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 IGHDP01880 384 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 SPATA31D3P0C874 917 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 FSHRP23945 695 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 CHMLP26374 656 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 RPS9P46781 194 aaKnown RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 GPC5P78333 572 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 DSG1Q02413 1049 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 SNW1Q13573 536 aaKnown RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 MLF2Q15773 248 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 PRR16Q569H4 304 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 PPM1JQ5JR12 505 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 ZBTB41Q5SVQ8 909 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 JAKMIP3Q5VZ66 844 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 AGMOQ6ZNB7 445 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 SPATA31D4Q6ZUB0 917 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 RAB11FIP4Q86YS3 637 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 RHPN2Q8IUC4 686 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 GPR65Q8IYL9 337 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 CNNM3Q8NE01 707 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 CCDC12Q8WUD4 166 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 CRYGNQ8WXF5 182 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 NELL1Q92832 810 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 MAP4K1Q92918 833 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 RIT2Q99578 217 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 JPH2Q9BR39 696 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 FDXACB1Q9BRP7 624 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 NIFKQ9BYG3 293 aaKnown RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 PRKD2Q9BZL6 878 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 NT5C3AQ9H0P0 336 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 UBN1Q9NPG3 1134 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 AGPAT5Q9NUQ2 364 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 SEPT9Q9UHD8 586 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 RBM8AQ9Y5S9 174 aaKnown RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 V9GY48 417 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 CHD8Q9HCK8 2581 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 SPAG17Q6Q759 2223 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 CACNA1GO43497 2377 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 VWA8A3KMH1 1905 aa6.74□□□□□ -1.33
HMGN1P20-201ENST00000411849 GPR179Q6PRD1 2367 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 IGKV6-21A0A0C4DH24 114 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 ESYT2A0FGR8 921 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
HMGN1P20-201ENST00000411849 SLC30A4O14863 429 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms