RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 CES5AQ6NT32 575 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 NOSTRINQ8IVI9 506 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 KIF2CQ99661 725 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 TMEM175Q9BSA9 504 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 VN1R3Q9BXE9 311 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 NFKBIZQ9BYH8 718 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 CDH22Q9UJ99 828 aa24.76■■□□□ 1.55
MSH6-202ENST00000411819 NOL7Q9UMY1 257 aaKnown RBP24.76■■□□□ 1.55
MSH6-202ENST00000411819 B4GALT5O43286 388 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 ALDH2P05091 517 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 CDR2LQ86X02 465 aaPredicted RBP24.75■■□□□ 1.55
MSH6-202ENST00000411819 HACE1Q8IYU2 909 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 MCPH1Q8NEM0 835 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 NACC1Q96RE7 527 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 GAD1Q99259 594 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 POLR3CQ9BUI4 534 aaPredicted RBP24.75■■□□□ 1.55
MSH6-202ENST00000411819 RNF39Q9H2S5 420 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 NXF3Q9H4D5 531 aaKnown RBP24.75■■□□□ 1.55
MSH6-202ENST00000411819 TSHZ2Q9NRE2 1034 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 DBR1Q9UK59 544 aaKnown RBP24.75■■□□□ 1.55
MSH6-202ENST00000411819 PRG3Q9Y2Y8 225 aaPredicted RBP24.75■■□□□ 1.55
MSH6-202ENST00000411819 ARIH1Q9Y4X5 557 aaPredicted RBP24.75■■□□□ 1.55
MSH6-202ENST00000411819 IRAK3Q9Y616 596 aa24.75■■□□□ 1.55
MSH6-202ENST00000411819 ARL5CA6NH57 179 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 SPDYE4A6NLX3 237 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 NRP1O14786 923 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 OR1G1P47890 313 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 SCNN1GP51170 649 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 NBR1Q14596 966 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 PTPN14Q15678 1187 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 RARS2Q5T160 578 aaKnown RBP24.74■■□□□ 1.55
MSH6-202ENST00000411819 HAUS3Q68CZ6 603 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 EDAQ92838 391 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 DZANK1Q9NVP4 752 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 STK39Q9UEW8 545 aa24.74■■□□□ 1.55
MSH6-202ENST00000411819 ARHGEF35A5YM69 484 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 NPTXRO95502 500 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 EPCAMP16422 314 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 RPA1P27694 616 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 ITIH3Q06033 890 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 SLC27A1Q6PCB7 646 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 HFE2Q6ZVN8 426 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 ZBTB8OSQ8IWT0 167 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 ZFP42Q96MM3 310 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 ADAM7Q9H2U9 754 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 TECTAO75443 2155 aa24.73■■□□□ 1.55
MSH6-202ENST00000411819 WEE2P0C1S8 567 aa24.72■■□□□ 1.55
MSH6-202ENST00000411819 TRAPPC10P48553 1259 aa24.72■■□□□ 1.55
MSH6-202ENST00000411819 TMEM132AQ24JP5 1023 aa24.72■■□□□ 1.55
MSH6-202ENST00000411819 C12orf76Q8N812 135 aaPredicted RBP24.72■■□□□ 1.55
MSH6-202ENST00000411819 EMILIN2Q9BXX0 1053 aa24.72■■□□□ 1.55
MSH6-202ENST00000411819 POMKQ9H5K3 350 aa24.72■■□□□ 1.55
MSH6-202ENST00000411819 C2CD2LO14523 706 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 URODP06132 367 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 AKAP5P24588 427 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 CCT6AP40227 531 aaKnown RBP24.71■■□□□ 1.55
MSH6-202ENST00000411819 PADI6Q6TGC4 694 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 ZBTB33Q86T24 672 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 CABP7Q86V35 215 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 PPFIBP1Q86W92 1011 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 COLGALT2Q8IYK4 626 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 RIPOR3Q96MK2 946 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 NECTIN4Q96NY8 510 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 MRPL17Q9NRX2 175 aaKnown RBP24.71■■□□□ 1.55
MSH6-202ENST00000411819 PRMT7Q9NVM4 692 aaPredicted RBP24.71■■□□□ 1.55
MSH6-202ENST00000411819 MARCH5Q9NX47 278 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 GIT1Q9Y2X7 761 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 NR2E1Q9Y466 385 aa24.71■■□□□ 1.55
MSH6-202ENST00000411819 INPPL1O15357 1258 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 NR1I2O75469 434 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 SOD2P04179 222 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 KLRC2P26717 231 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 MTHFRP42898 656 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 ZXDAP98168 799 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 TRIM67Q6ZTA4 783 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 PRIMPOLQ96LW4 560 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 MIOSQ9NXC5 875 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 PARP2Q9UGN5 583 aa24.7■■□□□ 1.54
MSH6-202ENST00000411819 LIG1P18858 919 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 DSC1Q08554 894 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 CDCA2Q69YH5 1023 aaPredicted RBP24.69■■□□□ 1.54
MSH6-202ENST00000411819 KANK3Q6NY19 840 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 PPP4R3CPQ6ZMV5 832 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 SLC22A17Q8WUG5 538 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 BSNDQ8WZ55 320 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 MFSD14AQ96MC6 490 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 KLHL5Q96PQ7 755 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 RPS6KC1Q96S38 1066 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 HERC2P3Q9BVR0 1158 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 C2orf40Q9H1Z8 148 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 KLK14Q9P0G3 267 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 LRWD1Q9UFC0 647 aa24.69■■□□□ 1.54
MSH6-202ENST00000411819 A0A1B0GUA9 196 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 TMEM221A6NGB7 291 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 M0R296 226 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 CNPP09543 421 aaKnown RBP24.68■■□□□ 1.54
MSH6-202ENST00000411819 CYP11B2P19099 503 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 FXR2P51116 673 aaKnown RBP eCLIP24.68■■□□□ 1.542e-7■■■■■ 29.3
MSH6-202ENST00000411819 RABEP1Q15276 862 aa24.68■■□□□ 1.54
MSH6-202ENST00000411819 DEPTORQ8TB45 409 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms