RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 RNF19AQ9NV58 838 aa7.29□□□□□ -1.24
LINC00396-201ENST00000411690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.29□□□□□ -1.24
LINC00396-201ENST00000411690 NUMBLQ9Y6R0 609 aa7.29□□□□□ -1.24
LINC00396-201ENST00000411690 MIA3Q5JRA6 1907 aa7.29□□□□□ -1.24
LINC00396-201ENST00000411690 DOCK5Q9H7D0 1870 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 GSTTP1A0A1W2PQM5 241 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 K7ELQ4 463 aaPredicted RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 RLBP1P12271 317 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 RPS9P46781 194 aaKnown RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 LIMK1P53667 647 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 HTR4Q13639 388 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 SIM2Q14190 667 aaPredicted RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 PPP2R5DQ14738 602 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 WTAPQ15007 396 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 PLCB4Q15147 1175 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 ASPRV1Q53RT3 343 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 FOXD4L5Q5VV16 416 aaPredicted RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 RSPO2Q6UXX9 243 aaPredicted RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 RNF169Q8NCN4 708 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 TRAPPC12Q8WVT3 735 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 TMEM40Q8WWA1 233 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 MAP4K1Q92918 833 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 CLDN23Q96B33 292 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 NELL2Q99435 816 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 PIDD1Q9HB75 910 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 MAN1C1Q9NR34 630 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
LINC00396-201ENST00000411690 C2orf16Q68DN1 1984 aa7.28□□□□□ -1.24
LINC00396-201ENST00000411690 CARNS1A5YM72 827 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 TULP1O00294 542 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 INPPL1O15357 1258 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 FOXP2O15409 715 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ZC3H11AO75152 810 aaKnown RBP eCLIP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 CNPP09543 421 aaKnown RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ZSCAN20P17040 1043 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 RBM25P49756 843 aaKnown RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 MTAPQ13126 283 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 DSC3Q14574 896 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 SOWAHCQ53LP3 525 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 CLLU1OSQ5K130 101 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ZMYM1Q5SVZ6 1142 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 PSAPL1Q6NUJ1 521 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ELMSAN1Q6PJG2 1045 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 MTHFD1LQ6UB35 978 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 GET4Q7L5D6 327 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 NLRX1Q86UT6 975 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 FAM228AQ86W67 206 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 TMEM173Q86WV6 379 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 DGKHQ86XP1 1220 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ECHDC2Q86YB7 292 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 C12orf50Q8NA57 414 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 PNMA1Q8ND90 353 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 HELQQ8TDG4 1101 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 SMG7Q92540 1137 aaKnown RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 IGSF21Q96ID5 467 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ZKSCAN3Q9BRR0 538 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 RPP25Q9BUL9 199 aaKnown RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 MRPL9Q9BYD2 267 aaKnown RBP7.27□□□□□ -1.25
LINC00396-201ENST00000411690 RHOBTB2Q9BYZ6 727 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 LRRCC1Q9C099 1032 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 AZI2Q9H6S1 392 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 KAT14Q9H8E8 782 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ENAMQ9NRM1 1142 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 ANKFY1Q9P2R3 1169 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 DPP7Q9UHL4 492 aa7.27□□□□□ -1.25
LINC00396-201ENST00000411690 COL4A3Q01955 1670 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 ZBTB5O15062 677 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 SMARCA5O60264 1052 aaPredicted RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 PPP1R11O60927 126 aaPredicted RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 ATP9AO75110 1047 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 RFPL2O75678 378 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 SSBP05455 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 MYBP10242 640 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 NCLP19338 710 aaKnown RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 SPINK2P20155 84 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 TARSP26639 723 aaKnown RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 KLRC1P26715 233 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 CRYBB1P53674 252 aaPredicted RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 PFKPQ01813 784 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 INTS6LQ5JSJ4 861 aaKnown RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 STPG1Q5TH74 334 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 VPS53Q5VIR6 699 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 PARM1Q6UWI2 310 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 MFSD6Q6ZSS7 791 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 KIAA0319LQ8IZA0 1049 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 ZCCHC14Q8WYQ9 949 aaKnown RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 FGF14Q92915 247 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 PHKBQ93100 1093 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 OSMRQ99650 979 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 LSM14BQ9BX40 385 aaKnown RBP7.26□□□□□ -1.25
LINC00396-201ENST00000411690 MYH6P13533 1939 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 FRMPD4Q14CM0 1322 aa7.26□□□□□ -1.25
LINC00396-201ENST00000411690 LAMA4Q16363 1823 aa7.25□□□□□ -1.25
LINC00396-201ENST00000411690 ZFYVE26Q68DK2 2539 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms