RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 TMEM260Q9NX78 707 aa2.79□□□□□ -1.96
RNU4-61P-201ENST00000411243 EME2A4GXA9 379 aaPredicted RBP2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 PRR5-ARHGAP8B1AHC4 643 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 SUSD5O60279 629 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 NANOS2P60321 138 aaKnown RBP2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 TAGLNQ01995 201 aaKnown RBP2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 TFF2Q03403 129 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 MRPL49Q13405 166 aaKnown RBP2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 STYK1Q6J9G0 422 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 OR10H5Q8NGA6 315 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 FOXB1Q99853 325 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 SPRTNQ9H040 489 aaPredicted RBP2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 CASS4Q9NQ75 786 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 WNT6Q9Y6F9 365 aa2.78□□□□□ -1.96
RNU4-61P-201ENST00000411243 GOLGA6L22H0YM25 854 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 ZNF561-AS1K7EIQ3 104 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 FOXP2O15409 715 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 DAPK3O43293 454 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 HNRNPLP14866 589 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 KRT15P19012 456 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 SOX10P56693 466 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 JAM2P57087 298 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 TM4SF20Q53R12 229 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 FAM102AQ5T9C2 384 aaPredicted RBP2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 OSTM1Q86WC4 334 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 NSMCE1Q8WV22 266 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 DYDC2Q96IM9 177 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 TRMOQ9BU70 441 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 TBCCD1Q9NVR7 557 aa2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 USP36Q9P275 1121 aaKnown RBP2.77□□□□□ -1.97
RNU4-61P-201ENST00000411243 CD1AP06126 327 aa2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 PPP2R2AP63151 447 aa2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 NTRK3Q16288 839 aa2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 GFI1BQ5VTD9 330 aa2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 YTHDF3Q7Z739 585 aaKnown RBP2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 FAM169BQ8N8A8 192 aa2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 DNAI1Q9UI46 699 aa2.76□□□□□ -1.97
RNU4-61P-201ENST00000411243 PLCD1P51178 756 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 METRNLQ641Q3 311 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 HIST2H2BCQ6DN03 193 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 AMIGO2Q86SJ2 522 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 XYLT1Q86Y38 959 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 IL17RAQ96F46 866 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 LYZL4Q96KX0 146 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 NEU1Q99519 415 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 TMEM79Q9BSE2 394 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 KCMF1Q9P0J7 381 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 CBLCQ9ULV8 474 aa2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 USP15Q9Y4E8 981 aaPredicted RBP2.75□□□□□ -1.97
RNU4-61P-201ENST00000411243 FAM90A10PA6NDY2 464 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 GTPBP1O00178 669 aaKnown RBP2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 KCNK3O14649 394 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 RBP3P10745 1247 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 PRKCSHP14314 528 aaPredicted RBP2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 SDHAP31040 664 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 RTN4RL1Q86UN2 441 aaPredicted RBP2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 FBXW5Q969U6 566 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 FOXRED1Q96CU9 486 aaPredicted RBP2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 VPS16Q9H269 839 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 SPON1Q9HCB6 807 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 KCNH7Q9NS40 1196 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 CATSPERZQ9NTU4 200 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 KCTD5Q9NXV2 234 aa2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 TUBA8Q9NY65 449 aaPredicted RBP2.74□□□□□ -1.97
RNU4-61P-201ENST00000411243 RASGRP1O95267 797 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 MGAT1P26572 445 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 CERS1P27544 350 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 CASRP41180 1078 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 PAK1Q13153 545 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 SEMA3AQ14563 771 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 SUPT20HL1Q3ZLR7 823 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 TSTD2Q5T7W7 516 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 LARP1BQ659C4 914 aaKnown RBP2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 NOSTRINQ8IVI9 506 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 ERRFI1Q9UJM3 462 aaPredicted RBP2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 ADAM21Q9UKJ8 722 aa2.73□□□□□ -1.97
RNU4-61P-201ENST00000411243 ELANEP08246 267 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 HSP90B1P14625 803 aaKnown RBP2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 RHDQ02161 417 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 SPDYE7PQ495Y7 208 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 SLC44A4Q53GD3 710 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 CATSPEREQ5SY80 951 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 B3GNTL1Q67FW5 361 aaPredicted RBP2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 C6orf15Q6UXA7 325 aaPredicted RBP2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 ZNF66Q6ZN08 573 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 MSL3Q8N5Y2 521 aaKnown RBP2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 OR5M3Q8NGP4 307 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 SPATA32Q96LK8 384 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 ING3Q9NXR8 418 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 DMTF1Q9Y222 760 aa2.72□□□□□ -1.97
RNU4-61P-201ENST00000411243 FAM90A8PA6NJQ4 464 aa2.71□□□□□ -1.98
RNU4-61P-201ENST00000411243 ORC4O43929 436 aa2.71□□□□□ -1.98
RNU4-61P-201ENST00000411243 ALPLP05186 524 aa2.71□□□□□ -1.98
RNU4-61P-201ENST00000411243 FAM90A13PP0C7W8 464 aa2.71□□□□□ -1.98
RNU4-61P-201ENST00000411243 FAM90A24PP0C7X0 464 aa2.71□□□□□ -1.98
RNU4-61P-201ENST00000411243 PYGMP11217 842 aa2.71□□□□□ -1.98
RNU4-61P-201ENST00000411243 SFPQP23246 707 aaKnown RBP eCLIP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms