RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 FBXL21Q9UKT6 434 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 SNX5Q9Y5X3 404 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 TOMM20Q15388 145 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 NAALADL2Q58DX5 795 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ADAM22Q9P0K1 906 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 GABBR1Q9UBS5 961 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 KLF15Q9UIH9 416 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 HECW2Q9P2P5 1572 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 SLC16A4O15374 487 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 CTNND1O60716 968 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 NUMBP49757 651 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 SULT1E1P49888 294 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 FKBP3Q00688 224 aaKnown RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 MED21Q13503 144 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 ALFQ53S48 1182 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 OOSP2Q86WS3 158 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 SLC35F6Q8N357 371 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 GPT2Q8TD30 523 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 FOXP1Q9H334 677 aaPredicted RBP11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 GTF2A1LQ9UNN4 478 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 PCDHGA4Q9Y5G9 962 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 PCDHA13Q9Y5I0 950 aa11.9□□□□□ -0.5
PRPF40A-202ENST00000410080 USP17L10C9JJH3 530 aa11.9□□□□□ -0.51
PRPF40A-202ENST00000410080 TBC1D1Q86TI0 1168 aaPredicted RBP11.9□□□□□ -0.51
PRPF40A-202ENST00000410080 NT5DC4Q86YG4 428 aa11.9□□□□□ -0.51
PRPF40A-202ENST00000410080 MB21D1Q8N884 522 aa11.9□□□□□ -0.51
PRPF40A-202ENST00000410080 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.51
PRPF40A-202ENST00000410080 MAPK13O15264 365 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 E2F5Q15329 346 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ERLEC1Q96DZ1 483 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 SPTLC3Q9NUV7 552 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 APOBEC2Q9Y235 224 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PLEKHA8P1O95397 391 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 RARBP10826 455 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 MRPL28Q13084 256 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 SPP2Q13103 211 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 FAM102AQ5T9C2 384 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 TTLL11Q8NHH1 800 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ZFYVE28Q9HCC9 887 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 MYH8P13535 1937 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PRR23D1E9PI22 279 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 TRAPPC3O43617 180 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PRR23D2P0DMB1 279 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 C16orf62Q7Z3J2 963 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ARMC2Q8NEN0 867 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ZSWIM5Q9P217 1185 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 SOX11P35716 441 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PBKQ96KB5 322 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 H2AFY2Q9P0M6 372 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 AFF2P51816 1311 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ZNF197O14709 1029 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 SH3BGRP55822 239 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ALDH6A1Q02252 535 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 ARHGAP15Q53QZ3 475 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 RFX8Q6ZV50 586 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 AGAP3Q96P47 875 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 GUCA1AP43080 201 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 MAPK9P45984 424 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 EPM2AIP1Q7L775 607 aaPredicted RBP11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 MFSD1Q9H3U5 465 aa11.89□□□□□ -0.51
PRPF40A-202ENST00000410080 RALBP11234 206 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 PRELPP51888 382 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SGO1Q5FBB7 561 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 FSCBQ5H9T9 825 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 GRAMD4Q6IC98 578 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 NUP93Q8N1F7 819 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 BHMT2Q9H2M3 363 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 POLD4Q9HCU8 107 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 GIMAP4Q9NUV9 329 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 FAM47E-STBD1D6RA91 191 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SPAG7O75391 227 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ATP1A1P05023 1023 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ROR1Q01973 937 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ATP11CQ8NB49 1132 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 STN1Q9H668 368 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SH2B2O14492 632 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 TPI1P60174 286 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms