RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 A0A0G2JLL6 359 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PMM2O15305 246 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 TACC1O75410 805 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 DGAT1O75907 488 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 GFPT2O94808 682 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 CCDC172P0C7W6 258 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 UCHL3P15374 230 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PON1P27169 355 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PRKCIP41743 596 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 MAGEA1P43355 309 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 RPIAP49247 311 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 NCKAP1LP55160 1127 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 AMPD2Q01433 879 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ENPEPQ07075 957 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 CETN1Q12798 172 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ASIC2Q16515 512 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ERCC6LQ2NKX8 1250 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ZC2HC1CQ53FD0 456 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 XKR9Q5GH70 373 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 DCAF17Q5H9S7 520 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 TCERG1LQ5VWI1 586 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PAPD7Q5XG87 772 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 MIS18BP1Q6P0N0 1132 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 RSRC2Q7L4I2 434 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 PRRT2Q7Z6L0 340 aaPredicted RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 CCDC155Q8N6L0 562 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 SPAG5Q96R06 1193 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 NTPCRQ9BSD7 190 aaKnown RBP8.17□□□□□ -1.1
CXCR4-202ENST00000409817 NLRC4Q9NPP4 1024 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 SLC9A2Q9UBY0 812 aa8.17□□□□□ -1.1
CXCR4-202ENST00000409817 LOC102724159A0A0B4J2E5 919 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 A0A0U1RQJ8 604 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CLIC2O15247 247 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 EXOC3O60645 756 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 SLC25A27O95847 323 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 KRT13P13646 458 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 H2AFXP16104 143 aaPredicted RBP8.16□□□□□ -1.1
CXCR4-202ENST00000409817 PRLRP16471 622 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 ERCC3P19447 782 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 FMO5P49326 533 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CASP4P49662 377 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CHMP4BP1P59074 171 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CKAP4Q07065 602 aaKnown RBP8.16□□□□□ -1.1
CXCR4-202ENST00000409817 KLHL30Q0D2K2 578 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 BFSP1Q12934 665 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 DMP1Q13316 513 aaPredicted RBP8.16□□□□□ -1.1
CXCR4-202ENST00000409817 RAPGEF1Q13905 1077 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 PLS1Q14651 629 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 PWP2Q15269 919 aaKnown RBP8.16□□□□□ -1.1
CXCR4-202ENST00000409817 SLC18A3Q16572 532 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 DPY19L2P1Q6NXN4 242 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 TRAPPC11Q7Z392 1133 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 HAUS6Q7Z4H7 955 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 VPS36Q86VN1 386 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 ANKRD35Q8N283 1001 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 ATRIPQ8WXE1 791 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CRACR2AQ9BSW2 395 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CCDC94Q9BW85 323 aaPredicted RBP8.16□□□□□ -1.1
CXCR4-202ENST00000409817 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 GCNT4Q9P109 453 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 KCNH4Q9UQ05 1017 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 JRKLQ9Y4A0 524 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 SAR1BQ9Y6B6 198 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 TLL2Q9Y6L7 1015 aa8.16□□□□□ -1.1
CXCR4-202ENST00000409817 CTAGE15A4D2H0 777 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 BTNL10A8MVZ5 291 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 BACH1O14867 736 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 ZNF263O14978 683 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 SIAH2O43255 324 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 TLR2O60603 784 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 RGS20O76081 388 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 PLEKP08567 350 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-202ENST00000409817 CTAGE8P0CG41 777 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 TGFB3P10600 412 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 FERP16591 822 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 FSHRP23945 695 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 IRX3P78415 501 aaPredicted RBP8.15□□□□□ -1.1
CXCR4-202ENST00000409817 CYP27A1Q02318 531 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 PPIL2Q13356 520 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 UGCGQ16739 394 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 XKR3Q5GH77 459 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 IQCEQ6IPM2 695 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 ABHD15Q6UXT9 468 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 LIAT1Q6ZQX7 453 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 ANO5Q75V66 913 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 FASTKD5Q7L8L6 764 aaKnown RBP8.15□□□□□ -1.1
CXCR4-202ENST00000409817 USP37Q86T82 979 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 CTAGE6Q86UF2 777 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 CTAGE4Q8IX94 777 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 XXYLT1Q8NBI6 393 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 LACRTQ9GZZ8 138 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 GABBR1Q9UBS5 961 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 FZD1Q9UP38 647 aa8.15□□□□□ -1.1
CXCR4-202ENST00000409817 PPME1Q9Y570 386 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms