RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PYM1Q9BRP8 204 aaKnown RBP24.61■■□□□ 1.53
PTCD3-203ENST00000409783 C17orf80Q9BSJ5 609 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 TMEM117Q9H0C3 514 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 ZHX3Q9H4I2 956 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 IPPQ9Y573 584 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 MRPL42Q9Y6G3 142 aaKnown RBP24.61■■□□□ 1.53
PTCD3-203ENST00000409783 EPOPA6NHQ4 379 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 TBKBP1A7MCY6 615 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 N4BP3O15049 544 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 HOXA2O43364 376 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 SLFN14P0C7P3 912 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 LONRF3Q496Y0 759 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 PAN2Q504Q3 1202 aaKnown RBP24.6■■□□□ 1.53
PTCD3-203ENST00000409783 FSIP1Q8NA03 581 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 MRPS27Q92552 414 aaKnown RBP24.6■■□□□ 1.53
PTCD3-203ENST00000409783 IPO9Q96P70 1041 aaKnown RBP24.6■■□□□ 1.53
PTCD3-203ENST00000409783 ACO2Q99798 780 aaKnown RBP24.6■■□□□ 1.53
PTCD3-203ENST00000409783 C7orf25Q9BPX7 421 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 RNF39Q9H2S5 420 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 ST6GALNAC4Q9H4F1 302 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 CERS4Q9HA82 394 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 PTPRHQ9HD43 1115 aa24.6■■□□□ 1.53
PTCD3-203ENST00000409783 ABLIM1O14639 778 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 NPTXRO95502 500 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 GAP43P17677 238 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 NMT1P30419 496 aaKnown RBP24.59■■□□□ 1.53
PTCD3-203ENST00000409783 ATF7IP2Q5U623 682 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 LRRC55Q6ZSA7 311 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 FAM178BQ8IXR5 827 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 CNNM3Q8NE01 707 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 HELQQ8TDG4 1101 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 TARS2Q9BW92 718 aaKnown RBP24.59■■□□□ 1.53
PTCD3-203ENST00000409783 STRA6Q9BX79 667 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 MRPL4Q9BYD3 311 aaKnown RBP24.59■■□□□ 1.53
PTCD3-203ENST00000409783 LRRC27Q9C0I9 530 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 NXF3Q9H4D5 531 aaKnown RBP24.59■■□□□ 1.53
PTCD3-203ENST00000409783 HCSTQ9UBK5 93 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 SEL1LQ9UBV2 794 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 TNFSF13BQ9Y275 285 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 HES2Q9Y543 173 aa24.59■■□□□ 1.53
PTCD3-203ENST00000409783 COL4A4P53420 1690 aaPredicted RBP24.59■■□□□ 1.53
PTCD3-203ENST00000409783 H0YCG3 227 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 OFD1O75665 1012 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 PROZP22891 400 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 GTF2BQ00403 316 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 AMPD3Q01432 767 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 PGBD4Q96DM1 585 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 CDX2Q99626 313 aaPredicted RBP24.58■■□□□ 1.53
PTCD3-203ENST00000409783 PRDM12Q9H4Q4 367 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 USP25Q9UHP3 1055 aa24.58■■□□□ 1.53
PTCD3-203ENST00000409783 K7ENM7 598 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 PPP1R37O75864 691 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 IDEP14735 1019 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 SCP2P22307 547 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 CASP1P29466 404 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 SYKP43405 635 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 TPRNQ4KMQ1 711 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 ZNF720Q7Z2F6 126 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 TMEM192Q8IY95 271 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 GRAMD1CQ8IYS0 662 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 ARNTL2Q8WYA1 636 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 CWH43Q9H720 699 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 OLFML3Q9NRN5 406 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 PANK4Q9NVE7 773 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 MTUS1Q9ULD2 1270 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 TBX20Q9UMR3 447 aa24.57■■□□□ 1.52
PTCD3-203ENST00000409783 RFXAPO00287 272 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 INPPL1O15357 1258 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 ITGA4P13612 1032 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 AFMP43652 599 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 EPC2Q52LR7 807 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 ZC2HC1CQ53FD0 456 aaPredicted RBP24.56■■□□□ 1.52
PTCD3-203ENST00000409783 PAGE5Q96GU1 130 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 SAMD11Q96NU1 681 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 FGFBP2Q9BYJ0 223 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 RSAD1Q9HA92 442 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 TYW1Q9NV66 732 aaKnown RBP24.56■■□□□ 1.52
PTCD3-203ENST00000409783 TRANK1O15050 2925 aa24.56■■□□□ 1.52
PTCD3-203ENST00000409783 C5orf67F2Z3F1 127 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 LPXNO60711 386 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 PIGRP01833 764 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 BMPR1AP36894 532 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 AFF1P51825 1210 aaKnown RBP24.55■■□□□ 1.52
PTCD3-203ENST00000409783 EHHADHQ08426 723 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 STRN3Q13033 797 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 COASYQ13057 564 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 CUL4BQ13620 913 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 TMEM132AQ24JP5 1023 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 HERC4Q5GLZ8 1057 aaPredicted RBP24.55■■□□□ 1.52
PTCD3-203ENST00000409783 GLB1LQ6UWU2 654 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 ZPBP2Q6X784 338 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 MAP4K3Q8IVH8 894 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 CCDC65Q8IXS2 484 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 CEP57L1Q8IYX8 460 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 ABI1Q8IZP0 508 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 SLC17A8Q8NDX2 589 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 ZBTB45Q96K62 511 aaPredicted RBP24.55■■□□□ 1.52
PTCD3-203ENST00000409783 TRIM6Q9C030 488 aaPredicted RBP24.55■■□□□ 1.52
PTCD3-203ENST00000409783 CDT1Q9H211 546 aa24.55■■□□□ 1.52
PTCD3-203ENST00000409783 BLZF1Q9H2G9 400 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms