RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 PSME4Q14997 1843 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 GPR75-ASB3A0A0A6YYF3 556 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TLDC2A0PJX2 215 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TSPY2A6NKD2 308 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TBX3O15119 743 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 EIF3DO15371 548 aaKnown RBP eCLIP3.39□□□□□ -1.87
CUL3-204ENST00000409777 PHF2O75151 1096 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ZPR1O75312 459 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 AFPP02771 609 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 RARGP13631 454 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 EZRP15311 586 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 CHN1P15882 459 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 FERP16591 822 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RDXP35241 583 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 PMS2P54278 862 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 DHX9Q08211 1270 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ITPK1Q13572 414 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 AUHQ13825 339 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 GIT2Q14161 759 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RASA2Q15283 850 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SGSM1Q2NKQ1 1148 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ASPRV1Q53RT3 343 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CAVIN4Q5BKX8 364 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SPTY2D1Q68D10 685 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 SDE2Q6IQ49 451 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MIS18BP1Q6P0N0 1132 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ALKBH5Q6P6C2 394 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 VSTM1Q6UX27 236 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CYFIP1Q7L576 1253 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 HEATR3Q7Z4Q2 680 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LRRC34Q8IZ02 419 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 OGFOD1Q8N543 542 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 FAM133AQ8N9E0 248 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LMO3Q8TAP4 145 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ETNPPLQ8TBG4 499 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TCP11Q8WWU5 503 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TAF4BQ92750 862 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 KCTD12Q96CX2 325 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 RPS6KC1Q96S38 1066 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PSMB7Q99436 277 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 FMO2Q99518 471 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PLIN2Q99541 437 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 USB1Q9BQ65 265 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 PLCD4Q9BRC7 762 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CAPN10Q9HC96 672 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ERVK-5Q9HDB9 667 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PPANQ9NQ55 473 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 AAASQ9NRG9 546 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 OLFML3Q9NRN5 406 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ADAMTS1Q9UHI8 967 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 AMACRQ9UHK6 382 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PNMA2Q9UL42 364 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PACSIN2Q9UNF0 486 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ASB3Q9Y575 518 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ACTL7BQ9Y614 415 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PFASO15067 1338 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 IGSF9BQ9UPX0 1349 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SCN4AP35499 1836 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LOC285556D6RIA3 1793 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 KLHL33A6NCF5 533 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SIGLEC16A6NMB1 481 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CCDC169A6NNP5 214 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MIF4GDA9UHW6 222 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 H0YHG0 523 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 KRIT1O00522 736 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RIPK2O43353 540 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LZTS3O60299 673 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 BUB1BO60566 1050 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 FLOT1O75955 427 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TDP2O95551 362 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MMEP08473 750 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 H2AFZP0C0S5 128 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LMNB1P20700 586 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 IVDP26440 423 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PRDX5P30044 214 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CHRNA3P32297 505 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PDE6BP35913 854 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CDR1P51861 262 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 NAPAP54920 295 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RHBDL3P58872 404 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ATP2B2Q01814 1243 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MYBPC2Q14324 1141 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ZKSCAN8Q15776 578 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 TMEM266Q2M3C6 531 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LETM2Q2VYF4 491 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 Q4G0T1 1027 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 EAPPQ56P03 285 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 KIAA1755Q5JYT7 1200 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RNF187Q5TA31 235 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 H2AFVQ71UI9 128 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TRMT10CQ7L0Y3 403 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 JAMLQ86YT9 394 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SLC9A9Q8IVB4 645 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 KLHL7Q8IXQ5 586 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PRELID2Q8N945 189 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SYT2Q8N9I0 419 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 NEK9Q8TD19 979 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SH3RF3Q8TEJ3 882 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms