RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 MSTO1Q9BUK6 570 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
SHANK2-204ENST00000409530 HAPLN2Q9GZV7 340 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 NDST4Q9H3R1 872 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ASAP2O43150 1006 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ERLIN2O94905 339 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 GNA14O95837 355 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ADAM17P78536 824 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 SNRNP35Q16560 246 aaKnown RBP17.09■□□□□ 0.33
SHANK2-204ENST00000409530 PTGISQ16647 500 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-204ENST00000409530 GPIHBP1Q8IV16 184 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 STARD7Q9NQZ5 370 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
SHANK2-204ENST00000409530 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.33
SHANK2-204ENST00000409530 CDC25BP30305 580 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 DLG4P78352 724 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 ZNF568Q3ZCX4 644 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 FKBP15Q5T1M5 1219 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 TRIM59Q8IWR1 403 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 TMEM134Q9H6X4 195 aa17.08■□□□□ 0.33
SHANK2-204ENST00000409530 SYCP1Q15431 976 aa17.08■□□□□ 0.32
SHANK2-204ENST00000409530 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
SHANK2-204ENST00000409530 EEF1DP3Q658K8 133 aa17.08■□□□□ 0.32
SHANK2-204ENST00000409530 FOXR2Q6PJQ5 311 aa17.08■□□□□ 0.32
SHANK2-204ENST00000409530 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.32
SHANK2-204ENST00000409530 TMEM40Q8WWA1 233 aa17.08■□□□□ 0.32
SHANK2-204ENST00000409530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.08■□□□□ 0.32
SHANK2-204ENST00000409530 DMAC2Q9NW81 257 aa17.08■□□□□ 0.32
SHANK2-204ENST00000409530 AGO2Q9UKV8 859 aaKnown RBP17.08■□□□□ 0.32
SHANK2-204ENST00000409530 CLDN3O15551 220 aa17.07■□□□□ 0.32
SHANK2-204ENST00000409530 DLATP10515 647 aaKnown RBP17.07■□□□□ 0.32
SHANK2-204ENST00000409530 IBSPP21815 317 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-204ENST00000409530 APBA1Q02410 837 aa17.07■□□□□ 0.32
SHANK2-204ENST00000409530 KCNH2Q12809 1159 aa17.07■□□□□ 0.32
SHANK2-204ENST00000409530 LMBRD2Q68DH5 695 aaPredicted RBP17.07■□□□□ 0.32
SHANK2-204ENST00000409530 SPECC1LQ69YQ0 1117 aa17.07■□□□□ 0.32
SHANK2-204ENST00000409530 FAM212AQ96EL1 285 aa17.07■□□□□ 0.32
SHANK2-204ENST00000409530 GOLGA6L6A8MZA4 724 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 GPR32O75388 356 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 KRT13P13646 458 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 THPOP40225 353 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 TNFSF9P41273 254 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 CATSPER4Q7RTX7 472 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 FRMD5Q7Z6J6 570 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 GPD1LQ8N335 351 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 CEP120Q8N960 986 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 ARRDC4Q8NCT1 418 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 TOPORSQ9NS56 1045 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 FAM207AQ9NSI2 230 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 LRRC10BA6NIK2 292 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 ABCD1P33897 745 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 NKX3-2P78367 333 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 BFSP1Q12934 665 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 SLC35C1Q96A29 364 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 GCOM2Q9BZD3 368 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 TRPV6Q9H1D0 765 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 ADAMTS10Q9H324 1103 aa17.06■□□□□ 0.32
SHANK2-204ENST00000409530 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-204ENST00000409530 MOXD2PA6NHM9 499 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 M0QZ92 97 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 ACKR2O00590 384 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 TSPAN1O60635 241 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 CLSTN1O94985 981 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 ARF4P18085 180 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 HOXC8P31273 242 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 ATN1P54259 1190 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 NOLC1Q14978 699 aaKnown RBP eCLIP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 NFIL3Q16649 462 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 ZNF410Q86VK4 478 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 SLC9A9Q8IVB4 645 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 PLEKHO2Q8TD55 490 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 FZD8Q9H461 694 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 METTL14Q9HCE5 456 aaKnown RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 CDY2AQ9Y6F7 541 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 TOM1L1O75674 476 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 ADKP55263 362 aaKnown RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 MARSP56192 900 aaKnown RBP17.05■□□□□ 0.32
SHANK2-204ENST00000409530 LRMPQ12912 555 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 TAF2Q6P1X5 1199 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 C12orf56Q8IXR9 622 aa17.05■□□□□ 0.32
SHANK2-204ENST00000409530 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
SHANK2-204ENST00000409530 GARTP22102 1010 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 GCLMP48507 274 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 VAMP7P51809 220 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 WNT7BP56706 349 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 SNX17Q15036 470 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 AMHR2Q16671 573 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 MKNK1Q9BUB5 465 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 RBAKQ9NYW8 714 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-204ENST00000409530 PIN4Q9Y237 131 aaKnown RBP17.04■□□□□ 0.32
SHANK2-204ENST00000409530 CNTNAP2Q9UHC6 1331 aa17.04■□□□□ 0.32
SHANK2-204ENST00000409530 B4GALT4O60513 344 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms