RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SHCBP1Q8NEM2 672 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 FAM167AQ96KS9 214 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 OSBPL9Q96SU4 736 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 EFCC1Q9HA90 598 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 TMEM8AQ9HCN3 771 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 TSKSQ9UJT2 592 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 SPDYE4A6NLX3 237 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 K7ERI5 159 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 SCP2P22307 547 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 GLYCTKQ8IVS8 523 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 DHX37Q8IY37 1157 aaKnown RBP22.43■■□□□ 1.18
USP39-203ENST00000409470 LNX1Q8TBB1 728 aaPredicted RBP22.43■■□□□ 1.18
USP39-203ENST00000409470 GTF3C2Q8WUA4 911 aaPredicted RBP22.43■■□□□ 1.18
USP39-203ENST00000409470 PSMB7Q99436 277 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 GPR20Q99678 358 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.43■■□□□ 1.189e-9■■■■■ 111.8
USP39-203ENST00000409470 NENFQ9UMX5 172 aa22.43■■□□□ 1.18
USP39-203ENST00000409470 GRIN3BO60391 1043 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 DLATP10515 647 aaKnown RBP22.42■■□□□ 1.18
USP39-203ENST00000409470 MARK3P27448 753 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 NOP2P46087 812 aaKnown RBP22.42■■□□□ 1.18
USP39-203ENST00000409470 IFI16Q16666 785 aaKnown RBP22.42■■□□□ 1.18
USP39-203ENST00000409470 HSDL1Q3SXM5 330 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 MSANTD4Q8NCY6 345 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 GPRC5AQ8NFJ5 357 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 TLR10Q9BXR5 811 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 PCDHGC5Q9Y5F6 944 aa22.42■■□□□ 1.18
USP39-203ENST00000409470 ZNF233A6NK53 670 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 TNFAIP3P21580 790 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 MKRN3Q13064 507 aaKnown RBP22.41■■□□□ 1.18
USP39-203ENST00000409470 KIF22Q14807 665 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 SLC30A5Q8TAD4 765 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 COG1Q8WTW3 980 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 SPATA33Q96N06 139 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 TOPORSQ9NS56 1045 aaPredicted RBP22.41■■□□□ 1.18
USP39-203ENST00000409470 SEPT11Q9NVA2 429 aaKnown RBP22.41■■□□□ 1.18
USP39-203ENST00000409470 USP20Q9Y2K6 914 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 ATP8B3O60423 1300 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 PDHXO00330 501 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 PDE2AO00408 941 aaPredicted RBP22.41■■□□□ 1.18
USP39-203ENST00000409470 FTCDO95954 541 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 CETPP11597 493 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 CXCR5P32302 372 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 GTF2H1P32780 548 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 CCNA1P78396 465 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 CREG2Q8IUH2 290 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 KIAA1586Q9HCI6 787 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 INTUQ9ULD6 942 aa22.41■■□□□ 1.18
USP39-203ENST00000409470 GRID2IPA4D2P6 1211 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 UNCXA6NJT0 531 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 ASB14A6NK59 587 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 EXTL3O43909 919 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 MAFO75444 373 aaPredicted RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 TXNP10599 105 aaKnown RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 BRD3Q15059 726 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 CCDC181Q5TID7 509 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 TRIM50Q86XT4 487 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 PPM1KQ8N3J5 372 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 BBXQ8WY36 941 aaPredicted RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 SEMA4DQ92854 862 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 PNKPQ96T60 521 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 ZNFX1Q9P2E3 1918 aaKnown RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 SEC31AO94979 1220 aaKnown RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 USP8P40818 1118 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 CC2D1AQ6P1N0 951 aaPredicted RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 FBXL13Q8NEE6 735 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 MORC4Q8TE76 937 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 KCNN1Q92952 543 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 SYT11Q9BT88 431 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 ARFGAP3Q9NP61 516 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 OGFRQ9NZT2 677 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 AGO2Q9UKV8 859 aaKnown RBP22.4■■□□□ 1.18
USP39-203ENST00000409470 COQ4Q9Y3A0 265 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 PPME1Q9Y570 386 aa22.4■■□□□ 1.18
USP39-203ENST00000409470 CCL15-CCL14A0A0B4J2E2 113 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 LOC102724159A0A0B4J2E5 919 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 TMCO5BA8MYB1 307 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 LGR5O75473 907 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 MATR3P43243 847 aaKnown RBP eCLIP22.39■■□□□ 1.17
USP39-203ENST00000409470 GTF2A2P52657 109 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 MFAP3P55082 362 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 CAPSQ13938 189 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 TTLL4Q14679 1199 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 PWP2Q15269 919 aaKnown RBP22.39■■□□□ 1.17
USP39-203ENST00000409470 CCL15Q16663 113 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 SLFN12LQ6IEE8 588 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 CCDC62Q6P9F0 684 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 OLIG1Q8TAK6 271 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 COPS5Q92905 334 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 KAT5Q92993 513 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 RAB20Q9NX57 234 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 MCM3APO60318 1980 aa22.39■■□□□ 1.17
USP39-203ENST00000409470 CCDC151A5D8V7 595 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 KIAA0391O15091 583 aaKnown RBP22.38■■□□□ 1.17
USP39-203ENST00000409470 GPC3P51654 580 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 GALCP54803 685 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 ENPEPQ07075 957 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 SV2AQ7L0J3 742 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 PLPPR4Q7Z2D5 763 aa22.38■■□□□ 1.17
USP39-203ENST00000409470 TAS1R2Q8TE23 839 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms