RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 APPL2Q8NEU8 664 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 TMEM143Q96AN5 459 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 LMTK2Q8IWU2 1503 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 ALS2CLQ60I27 953 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 NUDT12Q9BQG2 462 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 DYRK4Q9NR20 520 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 MAP3K7O43318 606 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 TRPV6Q9H1D0 765 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 NMT1P30419 496 aaKnown RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 GUCY1A2P33402 732 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 RFC5P40937 340 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 CDKL3Q8IVW4 592 aaPredicted RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 SH3TC2Q8TF17 1288 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 SIK2Q9H0K1 926 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 LCP1P13796 627 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 RBP5P82980 135 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 SCYL3Q8IZE3 742 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 DHX35Q9H5Z1 703 aaKnown RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 TJP2Q9UDY2 1190 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 DLC1Q96QB1 1528 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 KRT38O76015 456 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 MORC4Q8TE76 937 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 N4BP2L2Q92802 583 aaPredicted RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 PPWD1Q96BP3 646 aaKnown RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 PDS5AQ29RF7 1337 aaKnown RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 CYBBP04839 570 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 EXOSC10Q01780 885 aaKnown RBP26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 CAV1Q03135 178 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 SAMD7Q7Z3H4 446 aa26.65■■□□□ 1.86
SPIRE1-202ENST00000409402 SLC26A4O43511 780 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 AP1B1Q10567 949 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 GLE1Q53GS7 698 aaKnown RBP26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 TTC23LQ6PF05 361 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 ZBTB18Q99592 522 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 WDR91A4D1P6 747 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 ZFXP17010 805 aaPredicted RBP26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 TUBB6Q9BUF5 446 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 PARVAQ9NVD7 372 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 NOVA2Q9UNW9 492 aaKnown RBP26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 HSPA4LO95757 839 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 BCAR1P56945 870 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 AGAP1Q9UPQ3 857 aa26.64■■□□□ 1.86
SPIRE1-202ENST00000409402 SLC16A3O15427 465 aaKnown RBP26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 NNTQ13423 1086 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 ANKRD20A4Q4UJ75 823 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 ANKRD20A8PQ5CZ79 823 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 ANKRD20A2Q5SQ80 823 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 ANKRD20A1Q5TYW2 823 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 ZNF746Q6NUN9 644 aaPredicted RBP26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 CLEC10AQ8IUN9 316 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 EFHD1Q9BUP0 239 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 PHF20Q9BVI0 1012 aa26.64■■□□□ 1.85
SPIRE1-202ENST00000409402 ASAP2O43150 1006 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 RPS6KA5O75582 802 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 CLTAP09496 248 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 NCF2P19878 526 aaPredicted RBP26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 OCRLQ01968 901 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 ART3Q13508 389 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 RASA1P20936 1047 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 KCNB1Q14721 858 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 RNF217Q8TC41 542 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 OPHN1O60890 802 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 ZNF189O75820 626 aaPredicted RBP26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 WDR72Q3MJ13 1102 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 STOX1Q6ZVD7 989 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 RHOT1Q8IXI2 618 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 KCND2Q9NZV8 630 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 SMARCA1P28370 1054 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 CCT5P48643 541 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 EMC2Q15006 297 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 HSPBP1Q9NZL4 362 aa26.63■■□□□ 1.85
SPIRE1-202ENST00000409402 COPEO14579 308 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 TMEM132DQ14C87 1099 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 GBP5Q96PP8 586 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 TMEM247A6NEH6 219 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 PDHBP11177 359 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 ROR1Q01973 937 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 G3BP2Q9UN86 482 aaKnown RBP26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 SNX24Q9Y343 169 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 STILQ15468 1287 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 LARP7Q4G0J3 582 aaKnown RBP eCLIP26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 LMBRD2Q68DH5 695 aaPredicted RBP26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 TTC30BQ8N4P2 665 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 NPHP3-ACAD11A0A0J9YXS1 232 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 E5RI56 91 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 MGEA5O60502 916 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 FCGRTP55899 365 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 SCFD2Q8WU76 684 aa26.62■■□□□ 1.85
SPIRE1-202ENST00000409402 MAFGO15525 162 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 ZNF235Q14590 738 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 DCAF4L1Q3SXM0 396 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 TTC8Q8TAM2 541 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 NFU1Q9UMS0 254 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 ESRRBO95718 433 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 GTF2A2P52657 109 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 DGKDQ16760 1214 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 LSM7Q9UK45 103 aaKnown RBP26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 CPT1AP50416 773 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 SHC4Q6S5L8 630 aa26.61■■□□□ 1.85
SPIRE1-202ENST00000409402 WNT8AQ9H1J5 351 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms