RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 NELFBQ8WX92 580 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 TRIM43Q96BQ3 446 aaPredicted RBP22.43■■□□□ 1.18
VSX1-203ENST00000409285 PPP1R12CQ9BZL4 782 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 DNAJC25Q9H1X3 360 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 PTPRHQ9HD43 1115 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 CHST12Q9NRB3 414 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 PADI3Q9ULW8 664 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 ST3GAL5Q9UNP4 418 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 TTLL13PA6NNM8 815 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 ABLIM1O14639 778 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 B4GALT5O43286 388 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 NBNO60934 754 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 HOXA11P31270 313 aaPredicted RBP22.42■■□□□ 1.18
VSX1-203ENST00000409285 LIG4P49917 911 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 PAK2Q13177 524 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 ATF7IP2Q5U623 682 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 TTI2Q6NXR4 508 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 BICD1Q96G01 975 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 TARS2Q9BW92 718 aaKnown RBP22.42■■□□□ 1.18
VSX1-203ENST00000409285 OSBPL7Q9BZF2 842 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 AGPAT3Q9NRZ7 376 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 CTNND2Q9UQB3 1225 aa22.42■■□□□ 1.18
VSX1-203ENST00000409285 EVI5O60447 810 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 GARTP22102 1010 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 CYP2C18P33260 490 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 MYBPC2Q14324 1141 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 PLEKHG4Q58EX7 1191 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 SLFN12LQ6IEE8 588 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 KLHL10Q6JEL2 608 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 MFSD5Q6N075 450 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 NOTUMQ6P988 496 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 SLC9A9Q8IVB4 645 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 ZC3H3Q8IXZ2 948 aaKnown RBP22.41■■□□□ 1.18
VSX1-203ENST00000409285 APBB2Q92870 758 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 IFIH1Q9BYX4 1025 aaKnown RBP22.41■■□□□ 1.18
VSX1-203ENST00000409285 PDZD7Q9H5P4 517 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 PRDM5Q9NQX1 630 aaPredicted RBP22.41■■□□□ 1.18
VSX1-203ENST00000409285 TTC3P53804 2025 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 N4BP3O15049 544 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 KIAA0391O15091 583 aaKnown RBP22.41■■□□□ 1.18
VSX1-203ENST00000409285 CALUO43852 315 aaPredicted RBP22.41■■□□□ 1.18
VSX1-203ENST00000409285 RAG1P15918 1043 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 FGFR4P22455 802 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 ITGB8P26012 769 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 CD52P31358 61 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 PMS1P54277 932 aaKnown RBP22.41■■□□□ 1.18
VSX1-203ENST00000409285 MPZL3Q6UWV2 235 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 MED15Q96RN5 788 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 TSG101Q99816 390 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 TRAIPQ9BWF2 469 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 IKZF4Q9H2S9 585 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 TSPY26PQ9H489 355 aa22.41■■□□□ 1.18
VSX1-203ENST00000409285 ADSSP30520 456 aa22.4■■□□□ 1.18
VSX1-203ENST00000409285 ZNF165P49910 485 aa22.4■■□□□ 1.18
VSX1-203ENST00000409285 MCL1Q07820 350 aa22.4■■□□□ 1.18
VSX1-203ENST00000409285 ANKRD40Q6AI12 368 aa22.4■■□□□ 1.18
VSX1-203ENST00000409285 ENOX1Q8TC92 643 aaKnown RBP22.4■■□□□ 1.18
VSX1-203ENST00000409285 FTHL17Q9BXU8 183 aa22.4■■□□□ 1.18
VSX1-203ENST00000409285 PRKAG2Q9UGJ0 569 aa22.4■■□□□ 1.18
VSX1-203ENST00000409285 PIN4Q9Y237 131 aaKnown RBP22.4■■□□□ 1.18
VSX1-203ENST00000409285 A0A0B4J269 797 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 TRIM49BA6NDI0 452 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 ANKRD63C9JTQ0 380 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 CCL23P55773 120 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 SLC27A1Q6PCB7 646 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 APBB1IPQ7Z5R6 666 aaPredicted RBP22.39■■□□□ 1.17
VSX1-203ENST00000409285 C7orf61Q8IZ16 206 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 SCLYQ96I15 445 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 TMX1Q9H3N1 280 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 DMAC2Q9NW81 257 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 USP20Q9Y2K6 914 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 NR2E3Q9Y5X4 410 aa22.39■■□□□ 1.17
VSX1-203ENST00000409285 PTPRSQ13332 1948 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 TISP43B9A030 160 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 IKBKBO14920 756 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 CLDN3O15551 220 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 NR3C1P04150 777 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 PFKMP08237 780 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 RPL13P26373 211 aaKnown RBP22.38■■□□□ 1.17
VSX1-203ENST00000409285 FKBP3Q00688 224 aaKnown RBP22.38■■□□□ 1.17
VSX1-203ENST00000409285 NFX1Q12986 1120 aaKnown RBP22.38■■□□□ 1.17
VSX1-203ENST00000409285 HSP90AA2PQ14568 343 aaPredicted RBP22.38■■□□□ 1.17
VSX1-203ENST00000409285 DSC3Q14574 896 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 NOLC1Q14978 699 aaKnown RBP eCLIP22.38■■□□□ 1.17
VSX1-203ENST00000409285 DCAF4L1Q3SXM0 396 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 TMEM199Q8N511 208 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 FAM200AQ8TCP9 573 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 CPB2Q96IY4 423 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 DUSP9Q99956 384 aaKnown RBP22.38■■□□□ 1.17
VSX1-203ENST00000409285 ADPGKQ9BRR6 497 aa22.38■■□□□ 1.17
VSX1-203ENST00000409285 TDRD15B5MCY1 1934 aaKnown RBP22.37■■□□□ 1.17
VSX1-203ENST00000409285 FAM189A1O60320 539 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 MCF2P10911 925 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 MYL5Q02045 173 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 TMEM132AQ24JP5 1023 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 ZNF568Q3ZCX4 644 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 EEF1DP3Q658K8 133 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 ARMCX5Q6P1M9 558 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 LRRC55Q6ZSA7 311 aa22.37■■□□□ 1.17
VSX1-203ENST00000409285 POMGNT1Q8WZA1 660 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms