RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
SHANK2-203ENST00000409161 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
SHANK2-203ENST00000409161 STK32BQ9NY57 414 aa12.85□□□□□ -0.35
SHANK2-203ENST00000409161 ADGRA3Q8IWK6 1321 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CRYMQ14894 314 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 EFL1Q7Z2Z2 1120 aaKnown RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CMTR1Q8N1G2 835 aaKnown RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 PNMA6FA0A0J9YX94 578 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CCDC103Q8IW40 242 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 FAM167BQ9BTA0 163 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 BRD8Q9H0E9 1235 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 VPS11Q9H270 941 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 COPRSQ9NQ92 184 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 ADAMTS1Q9UHI8 967 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 G3BP2Q9UN86 482 aaKnown RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 TK2O00142 265 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 FBLN1P23142 703 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 AP3B2Q13367 1082 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 TRIM63Q969Q1 353 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 MICAL3Q7RTP6 2002 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CDC42BPAQ5VT25 1732 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 XDHP47989 1333 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CCDC195A0A1B0GUA6 201 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 AGBL2Q5U5Z8 902 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 DDIASQ8IXT1 998 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CLEC4FQ8N1N0 589 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 ZNF564Q8TBZ8 553 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 TOPORSQ9NS56 1045 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 ZFATQ9P243 1243 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 hCG_2014768A0A024R1R8 64 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 MARK3P27448 753 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 HADHAP40939 763 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 MRPS25P82663 173 aaKnown RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 ZNF699Q32M78 642 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 FOPNLQ96NB1 174 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 ZNF197O14709 1029 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 C7orf31Q8N865 590 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 DNAJC9Q8WXX5 260 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 PSD3Q9NYI0 1048 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 APPL1Q9UKG1 709 aa12.84□□□□□ -0.35
SHANK2-203ENST00000409161 ZMYND8Q9ULU4 1186 aaPredicted RBP12.84□□□□□ -0.35
SHANK2-203ENST00000409161 SERPINB3P29508 390 aa12.83□□□□□ -0.35
SHANK2-203ENST00000409161 PKP1Q13835 747 aa12.83□□□□□ -0.35
SHANK2-203ENST00000409161 DDHD1Q8NEL9 900 aa12.83□□□□□ -0.35
SHANK2-203ENST00000409161 RANBP17Q9H2T7 1088 aaKnown RBP12.83□□□□□ -0.35
SHANK2-203ENST00000409161 CNOT8Q9UFF9 292 aaKnown RBP12.83□□□□□ -0.35
SHANK2-203ENST00000409161 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.35
SHANK2-203ENST00000409161 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.35
SHANK2-203ENST00000409161 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 TYK2P29597 1187 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 BLVRAP53004 296 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 BBS7Q8IWZ6 715 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 ELMOD1Q8N336 334 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 FAM47DPA6NHR8 397 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 SERPINB9P50453 376 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 PRAMEP78395 509 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 TRIP4Q15650 581 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 FASTKD1Q53R41 847 aaKnown RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 PARVAQ9NVD7 372 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 H7C0S8 307 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 USP44Q9H0E7 712 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 A0A1W2PQC6 194 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 BTDP43251 543 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 PLEKHA8Q96JA3 519 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 MDH1P40925 334 aaKnown RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 AP3M2P53677 418 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 GADL1Q6ZQY3 521 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 TRPM8Q7Z2W7 1104 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 KRT35Q92764 455 aa12.83□□□□□ -0.36
SHANK2-203ENST00000409161 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
SHANK2-203ENST00000409161 SLC26A4O43511 780 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 CCT7Q99832 543 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 SLC9A2Q9UBY0 812 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 LZTS1Q9Y250 596 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 ATP7BP35670 1465 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 PPP1R37O75864 691 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 ACTN3Q08043 901 aaPredicted RBP12.82□□□□□ -0.36
SHANK2-203ENST00000409161 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 ZBED8Q8IZ13 594 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 EEF2KMTQ96G04 330 aa12.82□□□□□ -0.36
SHANK2-203ENST00000409161 MRPL48Q96GC5 212 aaKnown RBP12.82□□□□□ -0.36
SHANK2-203ENST00000409161 EGFL8Q99944 293 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms