RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 TRIM22Q8IYM9 498 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 HACE1Q8IYU2 909 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 FAM177A1Q8N128 213 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 FBXL16Q8N461 479 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 BRF1Q92994 677 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 SH2D3AQ9BRG2 576 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 ZDHHC7Q9NXF8 308 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 CA14Q9ULX7 337 aa13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
APOBEC3B-204ENST00000407298 TMEM150BA6NC51 233 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 EDIL3O43854 480 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 ERLIN2O94905 339 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 PAPLNO95428 1278 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 LAMP2P13473 410 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 HSPA4P34932 840 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 DSG1Q02413 1049 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 KIAA0319Q5VV43 1072 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 GALNT17Q6IS24 598 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 BLOC1S2Q6QNY1 142 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 OTUD6AQ7L8S5 288 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 KIAA2013Q8IYS2 634 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 RSAD2Q8WXG1 361 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 RUBCNQ92622 972 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 MYADMQ96S97 322 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 COLEC11Q9BWP8 271 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 PCDHA4Q9UN74 947 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 R4GN57 208 aa13.72□□□□□ -0.21
APOBEC3B-204ENST00000407298 B4GALT3O60512 393 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 CENPBP07199 599 aaPredicted RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 SDHBP21912 280 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 HOXA11P31270 313 aaPredicted RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 NTRK3Q16288 839 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 SPECC1Q5M775 1068 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 PLA2G4FQ68DD2 849 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 NOTUMQ6P988 496 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 DCLRE1AQ6PJP8 1040 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 TAS1R1Q7RTX1 841 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 GJA10Q969M2 543 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 RMDN1Q96DB5 314 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 DHX33Q9H6R0 707 aaKnown RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 ARHGEF3Q9NR81 526 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 SLC2A4RGQ9NR83 387 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 FNIP2Q9P278 1114 aa13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.21
APOBEC3B-204ENST00000407298 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.22
APOBEC3B-204ENST00000407298 ARL5CA6NH57 179 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 RFPL2O75678 378 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 DCNP07585 359 aaKnown RBP13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 SP9P0CG40 484 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 CPA1P15085 419 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 PSMA5P28066 241 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 AFF1P51825 1210 aaKnown RBP13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 SSRP1Q08945 709 aaKnown RBP13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 MXD4Q14582 209 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 USP41Q3LFD5 358 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 UBXN11Q5T124 520 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 GPR152Q8TDT2 470 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 TMEM143Q96AN5 459 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 MBOAT7Q96N66 472 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 TRIM6Q9C030 488 aaPredicted RBP13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 CHST7Q9NS84 486 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 MARCH5Q9NX47 278 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 GIT1Q9Y2X7 761 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
APOBEC3B-204ENST00000407298 ANHXE9PGG2 379 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 TDP2O95551 362 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 EFEMP2O95967 443 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 NPEPPSP55786 919 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 DSC1Q08554 894 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 TFDP1Q14186 410 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 KRT25Q7Z3Z0 450 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 RNF149Q8NC42 400 aa13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 ZNF707Q96C28 371 aaPredicted RBP13.69□□□□□ -0.22
APOBEC3B-204ENST00000407298 GAD1Q99259 594 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms