RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FRS3O43559 492 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 AKR1B10O60218 316 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 SETSIPP0DME0 302 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 ZKSCAN1P17029 563 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 THBS2P35442 1172 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 TM4SF4P48230 202 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 FXR1P51114 621 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 ITGA1P56199 1179 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 CDC42EP1Q00587 391 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 RAB39AQ14964 217 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 MPZL3Q6UWV2 235 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 ZNF605Q86T29 641 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 DPP9Q86TI2 863 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 RHOT1Q8IXI2 618 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 ABI1Q8IZP0 508 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 STPG3Q8N7X2 389 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 KYQ8NBH2 561 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 C3orf20Q8ND61 904 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 SMARCC2Q8TAQ2 1214 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 NSUN6Q8TEA1 469 aaKnown RBP5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 GFM2Q969S9 779 aaKnown RBP5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 FDXACB1Q9BRP7 624 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 LRRC27Q9C0I9 530 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 DMRT3Q9NQL9 472 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 DMTF1Q9Y222 760 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 NR2E3Q9Y5X4 410 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 IRS2Q9Y4H2 1338 aa5.87□□□□□ -1.47
HMGB3P18-201ENST00000406327 A0A088AWK7 358 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 A0A1W2PR48 441 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 CFAP69A5D8W1 941 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 PRAMEF4O60810 478 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 IL18BPO95998 194 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 MYL3P08590 195 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 SLC5A1P13866 664 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 CTSSP25774 331 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 MAP2K6P52564 334 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 WNT3AP56704 352 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 PPP3CAQ08209 521 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 C19orf54Q5BKX5 351 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 C1orf228Q6PIY5 440 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 RSPH3Q86UC2 560 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 LDHDQ86WU2 507 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 MYLK4Q86YV6 388 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 PARD3BQ8TEW8 1205 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 ZNF480Q8WV37 535 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 DPF2Q92785 391 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 CCDC138Q96M89 665 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 NAA15Q9BXJ9 866 aaKnown RBP5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 CNNM1Q9NRU3 951 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 CALCOCO1Q9P1Z2 691 aa5.86□□□□□ -1.47
HMGB3P18-201ENST00000406327 SCRIBQ14160 1630 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 A0A0A6YYK5 440 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 PHGDHO43175 533 aaKnown RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 TCEA3O75764 348 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 LY86O95711 162 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 FTH1P19P0C7X4 201 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 ALDH5A1P51649 535 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 HK3P52790 923 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 PER3P56645 1201 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 RAB1AP62820 205 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 DSC2Q02487 901 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 NOGQ13253 232 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 ADAM9Q13443 819 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 IL10RAQ13651 578 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 FGL2Q14314 439 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 MST1LQ2TV78 715 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 ZNF526Q8TF50 670 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 SNX33Q8WV41 574 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 PPM1EQ8WY54 764 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 KAT5Q92993 513 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 ZC3H10Q96K80 434 aaKnown RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 UIMC1Q96RL1 719 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 SOX7Q9BT81 388 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 LRFN3Q9BTN0 628 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 C11orf84Q9BUA3 381 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 BHMT2Q9H2M3 363 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 BCO1Q9HAY6 547 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 ARFGAP3Q9NP61 516 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 LMBRD1Q9NUN5 540 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 FAM53CQ9NYF3 392 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 RTEL1Q9NZ71 1219 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 FEZ2Q9UHY8 353 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 DNAI1Q9UI46 699 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 CROTQ9UKG9 612 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 TPCN1Q9ULQ1 816 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 PCDHGB6Q9Y5F9 930 aa5.85□□□□□ -1.47
HMGB3P18-201ENST00000406327 RSF1Q96T23 1441 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 RASA4BC9J798 803 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 RASA4O43374 803 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 TMEM127O75204 238 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 SEMA7AO75326 666 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 ADCY8P40145 1251 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 STK3Q13188 491 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 RAPGEF1Q13905 1077 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 EIF4HQ15056 248 aaKnown RBP5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 ATP2B3Q16720 1220 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 TMEM132EQ6IEE7 984 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 GADL1Q6ZQY3 521 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms