RNA–Protein interactions for RNA: ENST00000406293.7

SYNGR1-205, Transcript of synaptogyrin 1, humanhuman

TSL 2 BASIC

Gene SYNGR1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-205ENST00000406293 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.11■□□□□ 0.33
SYNGR1-205ENST00000406293 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
SYNGR1-205ENST00000406293 MARCH5Q9NX47 278 aa17.11■□□□□ 0.33
SYNGR1-205ENST00000406293 NDRG2Q9UN36 371 aaKnown RBP17.11■□□□□ 0.33
SYNGR1-205ENST00000406293 MRPS17Q9Y2R5 130 aaKnown RBP17.11■□□□□ 0.33
SYNGR1-205ENST00000406293 PKD1L2Q7Z442 2459 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 SMCO2A6NFE2 343 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 LRP3O75074 770 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 PROS1P07225 676 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 RPS9P46781 194 aaKnown RBP17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 DNM2P50570 870 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 CDC42EP1Q00587 391 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 DSG1Q02413 1049 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 SIM2Q14190 667 aaPredicted RBP17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 MTERF2Q49AM1 385 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 RHPN2Q8IUC4 686 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 FGF13Q92913 245 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
SYNGR1-205ENST00000406293 CNOT1A5YKK6 2376 aaKnown RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 ANKRD11Q6UB99 2663 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 PRC1O43663 620 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 ZNF862O60290 1169 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 NR1I2O75469 434 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 ZMYND10O75800 440 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 CALM1P0DP23 149 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 CALM2P0DP24 149 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 CALM3P0DP25 149 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 PTH1RQ03431 593 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 ADCY1Q08828 1119 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 CSRP2Q16527 193 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 AASDHQ4L235 1098 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 MB21D2Q8IYB1 491 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 SEPT9Q9UHD8 586 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-205ENST00000406293 FASNP49327 2511 aaKnown RBP17.08■□□□□ 0.33
SYNGR1-205ENST00000406293 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 CHMP2AO43633 222 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 LIN9Q5TKA1 542 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 TYW1BQ6NUM6 668 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 ITFG1Q8TB96 612 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 DISC1Q9NRI5 854 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 SLC12A7Q9Y666 1083 aa17.08■□□□□ 0.32
SYNGR1-205ENST00000406293 IGLV3-22A0A075B6J6 115 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 F8W810 466 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 CCL16O15467 120 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 SETQ01105 290 aaPredicted RBP17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 PPM1LQ5SGD2 360 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 PPP1R18Q6NYC8 613 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 KSR1Q8IVT5 923 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 COLGALT2Q8IYK4 626 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 COLEC11Q9BWP8 271 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 ZMIZ1Q9ULJ6 1067 aa17.07■□□□□ 0.32
SYNGR1-205ENST00000406293 SH2B2O14492 632 aaPredicted RBP17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 ITGA4P13612 1032 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 SHC2P98077 582 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 UGCGQ16739 394 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 USP41Q3LFD5 358 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 PRR16Q569H4 304 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 FANCBQ8NB91 859 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 ING5Q8WYH8 240 aa17.06■□□□□ 0.32
SYNGR1-205ENST00000406293 FOXD2O60548 495 aaPredicted RBP17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 XYLBO75191 536 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 CCR3P51677 355 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 SRSF5Q13243 272 aaKnown RBP17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 FUT10Q6P4F1 479 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 CEP68Q76N32 757 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 C12orf50Q8NA57 414 aaPredicted RBP17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 CHST7Q9NS84 486 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 AGPAT5Q9NUQ2 364 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 FNIP2Q9P278 1114 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 CEP295Q9C0D2 2601 aa17.05■□□□□ 0.32
SYNGR1-205ENST00000406293 DOCK6Q96HP0 2047 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 MTCL1Q9Y4B5 1905 aaKnown RBP17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 TMEM150BA6NC51 233 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 C1QTNF9BB2RNN3 333 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 CHURC1-FNTBB4DL54 471 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 PAPLNO95428 1278 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 C1RP00736 705 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 C8AP07357 584 aa17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 HNRNPA1P09651 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
SYNGR1-205ENST00000406293 C1QTNF9P0C862 333 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms