RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 RAB27AP51159 221 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 PRPF4BQ13523 1007 aaKnown RBP17.49■□□□□ 0.39
GDPD3-202ENST00000406256 LRRC55Q6ZSA7 311 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 SFR1Q86XK3 245 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 GRAMD1CQ8IYS0 662 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
GDPD3-202ENST00000406256 DEFB123Q8N688 67 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 CLP1Q92989 425 aaKnown RBP17.49■□□□□ 0.39
GDPD3-202ENST00000406256 FAM161BQ96MY7 647 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 IPO9Q96P70 1041 aaKnown RBP17.49■□□□□ 0.39
GDPD3-202ENST00000406256 C17orf80Q9BSJ5 609 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 HES2Q9Y543 173 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 IPPQ9Y573 584 aa17.49■□□□□ 0.39
GDPD3-202ENST00000406256 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
GDPD3-202ENST00000406256 K7ERI5 159 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 TRAK2O60296 914 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 KRT18P05783 430 aaKnown RBP17.48■□□□□ 0.39
GDPD3-202ENST00000406256 PROZP22891 400 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 AFF1P51825 1210 aaKnown RBP17.48■□□□□ 0.39
GDPD3-202ENST00000406256 ERVK-21P61565 698 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 EHHADHQ08426 723 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 LONRF3Q496Y0 759 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
GDPD3-202ENST00000406256 SLC27A1Q6PCB7 646 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 HAUS6Q7Z4H7 955 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 MYCT1Q8N699 235 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 FSIP1Q8NA03 581 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 MRPS27Q92552 414 aaKnown RBP17.48■□□□□ 0.39
GDPD3-202ENST00000406256 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
GDPD3-202ENST00000406256 C7orf25Q9BPX7 421 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 NXF3Q9H4D5 531 aaKnown RBP17.48■□□□□ 0.39
GDPD3-202ENST00000406256 ST6GALNAC4Q9H4F1 302 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 MAGEF1Q9HAY2 307 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 LRFN2Q9ULH4 789 aa17.48■□□□□ 0.39
GDPD3-202ENST00000406256 B4GALT3O60512 393 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 TBCAO75347 108 aaKnown RBP17.47■□□□□ 0.39
GDPD3-202ENST00000406256 NPTXRO95502 500 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 SLFN14P0C7P3 912 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 LIG1P18858 919 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 GTF2BQ00403 316 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 TMEM87AQ8NBN3 555 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 HELQQ8TDG4 1101 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 TARS2Q9BW92 718 aaKnown RBP17.47■□□□□ 0.39
GDPD3-202ENST00000406256 HAPLN2Q9GZV7 340 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 TMEM117Q9H0C3 514 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 CWH43Q9H720 699 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 CERS4Q9HA82 394 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 TNFSF13BQ9Y275 285 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 BRWD1Q9NSI6 2320 aa17.47■□□□□ 0.39
GDPD3-202ENST00000406256 XIRP2A4UGR9 3374 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 TBKBP1A7MCY6 615 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 K7ENM7 598 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 N4BP3O15049 544 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 INPPL1O15357 1258 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 LPXNO60711 386 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 OFD1O75665 1012 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 CASP5P51878 434 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 SMTNP53814 917 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 COASYQ13057 564 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 CUL4BQ13620 913 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 BTG3Q14201 252 aaPredicted RBP17.46■□□□□ 0.39
GDPD3-202ENST00000406256 ZC2HC1CQ53FD0 456 aaPredicted RBP17.46■□□□□ 0.39
GDPD3-202ENST00000406256 ATF7IP2Q5U623 682 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 SLC39A4Q6P5W5 647 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 ZNF720Q7Z2F6 126 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 FIBCD1Q8N539 461 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 RNF169Q8NCN4 708 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 GLIS3Q8NEA6 775 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 PAGE5Q96GU1 130 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 TGS1Q96RS0 853 aaKnown RBP17.46■□□□□ 0.39
GDPD3-202ENST00000406256 CXCL16Q9H2A7 254 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 IKZF4Q9H2S9 585 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 OLFML3Q9NRN5 406 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 SEL1LQ9UBV2 794 aa17.46■□□□□ 0.39
GDPD3-202ENST00000406256 RFXAPO00287 272 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 KLRC4O43908 158 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 GADD45BO75293 160 aaPredicted RBP17.45■□□□□ 0.38
GDPD3-202ENST00000406256 PIGRP01833 764 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 SKIP12755 728 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 GAP43P17677 238 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 SYKP43405 635 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 SNW1Q13573 536 aaKnown RBP17.45■□□□□ 0.38
GDPD3-202ENST00000406256 ADGRE1Q14246 886 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 MAP4K3Q8IVH8 894 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 FMR1NBQ8N0W7 255 aaPredicted RBP17.45■□□□□ 0.38
GDPD3-202ENST00000406256 CEP120Q8N960 986 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 GSTCDQ8NEC7 633 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 HPS3Q969F9 1004 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 ZBTB45Q96K62 511 aaPredicted RBP17.45■□□□□ 0.38
GDPD3-202ENST00000406256 CDX2Q99626 313 aaPredicted RBP17.45■□□□□ 0.38
GDPD3-202ENST00000406256 MRPL4Q9BYD3 311 aaKnown RBP17.45■□□□□ 0.38
GDPD3-202ENST00000406256 CDT1Q9H211 546 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 ZHX3Q9H4I2 956 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 KCNG1Q9UIX4 513 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 TBX20Q9UMR3 447 aa17.45■□□□□ 0.38
GDPD3-202ENST00000406256 C5orf67F2Z3F1 127 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms