RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.186e-7■□□□□ 10.7
ATG4B-206ENST00000405546 IGLV3-22A0A075B6J6 115 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 ENTPD3O75355 529 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 UBOX5O94941 541 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 PLTPP55058 493 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 PEX3P56589 373 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 TRAF1Q13077 416 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 PLCB4Q15147 1175 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 CAPRIN2Q6IMN6 1127 aaKnown RBP16.17■□□□□ 0.18
ATG4B-206ENST00000405546 SYCE1Q8N0S2 351 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 DYDC1Q8WWB3 177 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 GLG1Q92896 1179 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 ZNF570Q96NI8 536 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 PSMD1Q99460 953 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 THAP2Q9H0W7 228 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 AZI2Q9H6S1 392 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 RAVER2Q9HCJ3 691 aaKnown RBP16.17■□□□□ 0.18
ATG4B-206ENST00000405546 GPRC5CQ9NQ84 441 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 UTP11Q9Y3A2 253 aaKnown RBP16.17■□□□□ 0.18
ATG4B-206ENST00000405546 SMCHD1A6NHR9 2005 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 YDJCA8MPS7 323 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 PDHA1P08559 390 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 CIITAP33076 1130 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 ARMC2Q8NEN0 867 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 TUFT1Q9NNX1 390 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 ZNF70Q9UC06 446 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-206ENST00000405546 DBR1Q9UK59 544 aaKnown RBP16.17■□□□□ 0.18
ATG4B-206ENST00000405546 PPP1R9AQ9ULJ8 1098 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
ATG4B-206ENST00000405546 SLC16A4O15374 487 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 MGRN1O60291 552 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 PSMD10O75832 226 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 XRCC4Q13426 336 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ANKRD42Q8N9B4 389 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 LRRC45Q96CN5 670 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ISCUQ9H1K1 167 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 DNAJC17Q9NVM6 304 aaKnown RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ATXN2Q99700 1313 aaKnown RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 F8VZ95 297 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 NFIBO00712 420 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ATMINO43313 823 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 LMNB1P20700 586 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 ARHGAP27Q6ZUM4 889 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 STK33Q9BYT3 514 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 SIX2Q9NPC8 291 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 OLFML3Q9NRN5 406 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 SLC16A3O15427 465 aaKnown RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 BCRP11274 1271 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-206ENST00000405546 XKR9Q5GH70 373 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 AADACL2Q6P093 401 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 CCDC50Q8IVM0 306 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 SNX24Q9Y343 169 aa16.16■□□□□ 0.18
ATG4B-206ENST00000405546 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
ATG4B-206ENST00000405546 FTLP02792 175 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-206ENST00000405546 NPEPPSP55786 919 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 ZNF572Q7Z3I7 529 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-206ENST00000405546 ARHGEF26Q96DR7 871 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 SAAL1Q96ER3 474 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 KIFC3Q9BVG8 833 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 APEX2Q9UBZ4 518 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
ATG4B-206ENST00000405546 DLATP10515 647 aaKnown RBP16.15■□□□□ 0.18
ATG4B-206ENST00000405546 INHBEP58166 350 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 BFSP1Q12934 665 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 CD302Q8IX05 232 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 ANKS4BQ8N8V4 417 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 ZSWIM2Q8NEG5 633 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 GDAP1Q8TB36 358 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 KAT5Q92993 513 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 SAMD15Q9P1V8 674 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 PTPN22Q9Y2R2 807 aa16.15■□□□□ 0.18
ATG4B-206ENST00000405546 GOLGA6L10A0A0M3HER8 536 aa16.14■□□□□ 0.18
ATG4B-206ENST00000405546 PHLDB3Q6NSJ2 640 aa16.14■□□□□ 0.18
ATG4B-206ENST00000405546 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.18
ATG4B-206ENST00000405546 SPATS2LQ9NUQ6 558 aaKnown RBP16.14■□□□□ 0.18
ATG4B-206ENST00000405546 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 H0Y3Z8 333 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 PLA2G4FQ68DD2 849 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 FAM47EQ6ZV65 393 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 IL31RAQ8NI17 732 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 FAM84AQ96KN4 292 aa16.14■□□□□ 0.17
ATG4B-206ENST00000405546 PAGR1Q9BTK6 254 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms