RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MIGA2Q7L4E1 593 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 CLEC14AQ86T13 490 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 SAPCD2Q86UD0 394 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 IFNL2Q8IZJ0 200 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 OR14K1Q8NGZ2 314 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 CCHCR1Q8TD31 782 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 STON2Q8WXE9 905 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 C1GALT1C1Q96EU7 318 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 YTHDC1Q96MU7 727 aaKnown RBP4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 C7orf25Q9BPX7 421 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 PDCD2LQ9BRP1 358 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 STAP2Q9UGK3 403 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 FBXO10Q9UK96 956 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 SMG5Q9UPR3 1016 aaKnown RBP4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 NR2E3Q9Y5X4 410 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 RPTORQ8N122 1335 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 PMM2O15305 246 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 CYP7B1O75881 506 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 TUSC2O75896 110 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 ALDH1A2O94788 518 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 FSBPO95073 299 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 RHCEP18577 417 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 CSF2RBP32927 897 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 WASP42768 502 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 MEOX1P50221 254 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 ATP2C1P98194 919 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 PURAQ00577 322 aaKnown RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 RHDQ02161 417 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 CCDC157Q569K6 752 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 NPNTQ6UXI9 565 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZGPATQ8N5A5 531 aaKnown RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 SH2D3CQ8N5H7 860 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 LILRA3Q8N6C8 439 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 TXNDC5Q8NBS9 432 aaKnown RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 PJA1Q8NG27 643 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 PLBD2Q8NHP8 589 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 SNX33Q8WV41 574 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 RGMAQ96B86 450 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 RPL10LQ96L21 214 aaKnown RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 RPS6KC1Q96S38 1066 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 VRK1Q99986 396 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 BHMT2Q9H2M3 363 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 USP25Q9UHP3 1055 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 PCDHA3Q9Y5H8 950 aa4.95□□□□□ -1.62
HMGB1P17-201ENST00000403495 TCAF2A6NFQ2 919 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 H3BML4 177 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 DAPK3O43293 454 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 CHGBP05060 677 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 NBPF7P0C2Y1 421 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 FPR1P21462 350 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 GLDCP23378 1020 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 ECHS1P30084 290 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 SARSP49591 514 aaKnown RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 PER3P56645 1201 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 SAFBQ15424 915 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 KIAA0753Q2KHM9 967 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 MST1LQ2TV78 715 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 CHST15Q7LFX5 561 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 TAS1R1Q7RTX1 841 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 SKAP1Q86WV1 359 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 DRC7Q8IY82 874 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 UNC5BQ8IZJ1 945 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 PQLC1Q8N2U9 271 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 CELF5Q8N6W0 485 aaKnown RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 PLA2G15Q8NCC3 412 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 TMX3Q96JJ7 454 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 CLPTM1LQ96KA5 538 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 DMRTA2Q96SC8 542 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 UHRF1Q96T88 793 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 OSBPL6Q9BZF3 934 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 TMEM168Q9H0V1 697 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 NTMQ9P121 344 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 NCDNQ9UBB6 729 aa4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 RUVBL1Q9Y265 456 aaKnown RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 CTDP1Q9Y5B0 961 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P17-201ENST00000403495 TPD52L2O43399 206 aaKnown RBP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 ITGA10O75578 1167 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 TOX4O94842 621 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 AMY1AP04745 511 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 PCSK1P29120 753 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 SREBF1P36956 1147 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 CASRP41180 1078 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 ZNF280AP59817 542 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 BPIFB4P59827 614 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 BIRC2Q13490 618 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 MAN2A1Q16706 1144 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 KHDC1Q4VXA5 237 aaKnown RBP4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 MCTP1Q6DN14 999 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 RSPH3Q86UC2 560 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 CARFQ8N187 725 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 KLHDC4Q8TBB5 520 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 MDM1Q8TC05 714 aa4.93□□□□□ -1.62
HMGB1P17-201ENST00000403495 ADAMTS17Q8TE56 1095 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms