RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TMC2Q8TDI7 906 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 CAVIN3Q969G5 261 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 BICD1Q96G01 975 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 CALR3Q96L12 384 aaKnown RBP19.33■□□□□ 0.69
CHTOP-205ENST00000403433 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.33■□□□□ 0.692e-9■■■■□ 19.3
CHTOP-205ENST00000403433 THAP2Q9H0W7 228 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 XPNPEP1Q9NQW7 623 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 TAS2R14Q9NYV8 317 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 ZHX1Q9UKY1 873 aaPredicted RBP19.33■□□□□ 0.69
CHTOP-205ENST00000403433 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.69
CHTOP-205ENST00000403433 TELO2Q9Y4R8 837 aa19.33■□□□□ 0.69
CHTOP-205ENST00000403433 POLR2AP24928 1970 aaKnown RBP19.33■□□□□ 0.69
CHTOP-205ENST00000403433 ZC3H4Q9UPT8 1303 aaKnown RBP19.33■□□□□ 0.69
CHTOP-205ENST00000403433 A0A0G2JMZ2 1700 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 GOLGA6BA6NDN3 693 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.68
CHTOP-205ENST00000403433 GLI1P08151 1106 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 MFAP3P55082 362 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 SLC39A4Q6P5W5 647 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 KLHL7Q8IXQ5 586 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 RPUSD2Q8IZ73 545 aaKnown RBP19.33■□□□□ 0.68
CHTOP-205ENST00000403433 ANKRD35Q8N283 1001 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 PARD3BQ8TEW8 1205 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 HES6Q96HZ4 224 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 EPB41L5Q9HCM4 733 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 PDLIM7Q9NR12 457 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 SNCAIPQ9Y6H5 919 aa19.33■□□□□ 0.68
CHTOP-205ENST00000403433 ADGRA3Q8IWK6 1321 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 RNF40O75150 1001 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 PHACTR2O75167 634 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 USP2O75604 605 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-205ENST00000403433 GTF2H1P32780 548 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 CYP24A1Q07973 514 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 NNTQ13423 1086 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 VGLL4Q14135 290 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 MTERF2Q49AM1 385 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 BRDTQ58F21 947 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-205ENST00000403433 PALB2Q86YC2 1186 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 RHOT2Q8IXI1 618 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 GPD1LQ8N335 351 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 ARHGEF26Q96DR7 871 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 MFSD14AQ96MC6 490 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 FBXL18Q96ME1 805 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 PSD3Q9NYI0 1048 aa19.32■□□□□ 0.68
CHTOP-205ENST00000403433 ERICH4A6NGS2 130 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 SYF2O95926 243 aaKnown RBP19.31■□□□□ 0.68
CHTOP-205ENST00000403433 ZBTB48P10074 688 aaPredicted RBP19.31■□□□□ 0.68
CHTOP-205ENST00000403433 GARTP22102 1010 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 ICAM3P32942 547 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 POLGP54098 1239 aaPredicted RBP19.31■□□□□ 0.68
CHTOP-205ENST00000403433 FAM71AQ8IYT1 594 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 RASGEF1CQ8N431 466 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 SCFD2Q8WU76 684 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 SEMA4DQ92854 862 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 KAT5Q92993 513 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 NT5C1BQ96P26 610 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.31■□□□□ 0.686e-8■■■■■ 32.4
CHTOP-205ENST00000403433 KCNG1Q9UIX4 513 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 OTOFQ9HC10 1997 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 RAD51CO43502 376 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 GGCXP38435 758 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 GPC3P51654 580 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 PPATQ06203 517 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 ENPEPQ07075 957 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 EMC2Q15006 297 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 CYFIP1Q7L576 1253 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 GOLGA6L1Q8N7Z2 621 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 FBXL13Q8NEE6 735 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 KREMEN1Q96MU8 473 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 ZNF302Q9NR11 478 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 ARHGAP28Q9P2N2 729 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 FBXO40Q9UH90 709 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 COQ4Q9Y3A0 265 aa19.31■□□□□ 0.68
CHTOP-205ENST00000403433 PAPPA2Q9BXP8 1791 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 CCDC188H7C350 402 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 FTLP02792 175 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-205ENST00000403433 SP2Q02086 613 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 TREML2Q5T2D2 321 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-205ENST00000403433 EPS8L1Q8TE68 723 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 IFT81Q8WYA0 676 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 SHC3Q92529 594 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 POP1Q99575 1024 aaKnown RBP19.3■□□□□ 0.68
CHTOP-205ENST00000403433 ISCUQ9H1K1 167 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 TOPORSQ9NS56 1045 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-205ENST00000403433 DIS3Q9Y2L1 958 aaKnown RBP19.3■□□□□ 0.68
CHTOP-205ENST00000403433 CSADQ9Y600 493 aa19.3■□□□□ 0.68
CHTOP-205ENST00000403433 ESYT3A0FGR9 886 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 ZSCAN5CA6NGD5 496 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-205ENST00000403433 KRIT1O00522 736 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 SGPL1O95470 568 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 OATP04181 439 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 LMAN1P49257 510 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 CARSP49589 748 aaKnown RBP19.29■□□□□ 0.68
CHTOP-205ENST00000403433 LIG4P49917 911 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 ALDH5A1P51649 535 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-205ENST00000403433 CNTN2Q02246 1040 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 LBX2Q6XYB7 198 aa19.29■□□□□ 0.68
CHTOP-205ENST00000403433 SEPT14Q6ZU15 432 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms