RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 A0A0G2JND7 137 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TAF1BQ53T94 588 aaPredicted RBP19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TRIM67Q6ZTA4 783 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 FASTKD5Q7L8L6 764 aaKnown RBP19.35■□□□□ 0.69
COL18A1-204ENST00000400337 MORC4Q8TE76 937 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 DIP2CQ9Y2E4 1556 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 MAPK13O15264 365 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 CFLARO15519 480 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 DGAT1O75907 488 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 FXR1P51114 621 aaKnown RBP eCLIP19.35■□□□□ 0.69
COL18A1-204ENST00000400337 TMCO4Q5TGY1 634 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 SPATA4Q8NEY3 305 aa19.35■□□□□ 0.69
COL18A1-204ENST00000400337 XKR3Q5GH77 459 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 E4F1Q66K89 784 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-204ENST00000400337 TEX2Q8IWB9 1127 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 SLITRK6Q9H5Y7 841 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 VCPKMTQ9H867 229 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 ACTR5Q9H9F9 607 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-204ENST00000400337 ABCF3Q9NUQ8 709 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 HSPA4LO95757 839 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 PRKCBP05771 671 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 COPB2P35606 906 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 AP3M2P53677 418 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 BCAR1P56945 870 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 RSBN1LQ6PCB5 846 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-204ENST00000400337 CRLF3Q8IUI8 442 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 MLXIPLQ9NP71 852 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 POLIQ9UNA4 740 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 KLRK1P26718 216 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 CCZ1BP86790 482 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 CCZ1P86791 482 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-204ENST00000400337 EPM2AIP1Q7L775 607 aaPredicted RBP19.34■□□□□ 0.69
COL18A1-204ENST00000400337 GCNAQ96QF7 691 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 FSD1LQ9BXM9 530 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 DONSONQ9NYP3 566 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 SCAF8Q9UPN6 1271 aaKnown RBP19.34■□□□□ 0.69
COL18A1-204ENST00000400337 GGPS1O95749 300 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 KRT14P02533 472 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 MYBP10242 640 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 ACOT2P49753 483 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 NR1I3Q14994 352 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 TERF2Q15554 542 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 TTC25Q96NG3 672 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 PAMP19021 973 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 ART3Q13508 389 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 ZNF280CQ8ND82 737 aa19.34■□□□□ 0.69
COL18A1-204ENST00000400337 IQSEC2Q5JU85 1478 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 DIP2AQ14689 1571 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 GPR75-ASB3A0A0A6YYF3 556 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 NR3C2P08235 984 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 SCP2P22307 547 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 WDR72Q3MJ13 1102 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 FAM151AQ8WW52 585 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.69
COL18A1-204ENST00000400337 PARVAQ9NVD7 372 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 APEX2Q9UBZ4 518 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 AMACRQ9UHK6 382 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 PI4K2BG5E9Z4 385 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 SLC18A3Q16572 532 aa19.33■□□□□ 0.69
COL18A1-204ENST00000400337 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.69
COL18A1-204ENST00000400337 FAM187AA6NFU0 413 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 NME3Q13232 169 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 HEATR6Q6AI08 1181 aaKnown RBP19.33■□□□□ 0.68
COL18A1-204ENST00000400337 LRRC31Q6UY01 552 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 BARGINQ6ZT62 677 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 TTC39CQ8N584 583 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 TIPINQ9BVW5 301 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 DHX35Q9H5Z1 703 aaKnown RBP19.33■□□□□ 0.68
COL18A1-204ENST00000400337 SUCLA2Q9P2R7 463 aaPredicted RBP19.33■□□□□ 0.68
COL18A1-204ENST00000400337 KDM6AO15550 1401 aaPredicted RBP19.33■□□□□ 0.68
COL18A1-204ENST00000400337 KLHL38Q2WGJ6 581 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 PPM1NQ8N819 430 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 HAUS8Q9BT25 410 aa19.33■□□□□ 0.68
COL18A1-204ENST00000400337 PSMD14O00487 310 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 RTN2O75298 545 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 FMO5P49326 533 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 GRIN1Q05586 938 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 SLC10A5Q5PT55 438 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 KCNV1Q6PIU1 500 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 DDX56Q9NY93 547 aaKnown RBP19.32■□□□□ 0.68
COL18A1-204ENST00000400337 ZNF185O15231 689 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 UCHL3P15374 230 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 PDIA2Q13087 525 aaKnown RBP19.32■□□□□ 0.68
COL18A1-204ENST00000400337 TBC1D1Q86TI0 1168 aaPredicted RBP19.32■□□□□ 0.68
COL18A1-204ENST00000400337 STK33Q9BYT3 514 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 TRIM55Q9BYV6 548 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 FRMD3A2A2Y4 597 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 NVLO15381 856 aaKnown RBP19.32■□□□□ 0.68
COL18A1-204ENST00000400337 RASIP1Q5U651 963 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 PRAMEF18Q5VWM3 479 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 ZBED8Q8IZ13 594 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 VPS11Q9H270 941 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 ZCCHC17Q9NP64 241 aaKnown RBP19.32■□□□□ 0.68
COL18A1-204ENST00000400337 INTUQ9ULD6 942 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 PPP1R9AQ9ULJ8 1098 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 SNX12Q9UMY4 172 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 CNTNAP4Q9C0A0 1308 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 ANKRD65E5RJM6 399 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 GNGT2O14610 69 aa19.32■□□□□ 0.68
COL18A1-204ENST00000400337 CDH6P55285 790 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms