RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 EDNRBP24530 442 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.326e-7■■■■□ 22.3
CDC42-203ENST00000400259 GPC3P51654 580 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 HADHBP55084 474 aaKnown RBP17.02■□□□□ 0.32
CDC42-203ENST00000400259 SOX10P56693 466 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 PPATQ06203 517 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 PEX26Q7Z412 305 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 FAM71AQ8IYT1 594 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 SAAL1Q96ER3 474 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
CDC42-203ENST00000400259 BTBD7Q9P203 1132 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.32
CDC42-203ENST00000400259 ZC3H4Q9UPT8 1303 aaKnown RBP17.02■□□□□ 0.32
CDC42-203ENST00000400259 KCNK3O14649 394 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 CNTN2Q02246 1040 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 CYP24A1Q07973 514 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 TAS1R3Q7RTX0 852 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 ANKRD35Q8N283 1001 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
CDC42-203ENST00000400259 SLC35G2Q8TBE7 412 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 HES6Q96HZ4 224 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 CSADQ9Y600 493 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 UTRNP46939 3433 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 OATP04181 439 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 ATP4AP20648 1035 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 SP4Q02446 784 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 EMC2Q15006 297 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 RASGEF1CQ8N431 466 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 FAM71BQ8TC56 605 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 POMGNT1Q8WZA1 660 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 SHC3Q92529 594 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 ISCUQ9H1K1 167 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 ZNF302Q9NR11 478 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 GDF3Q9NR23 364 aa17.01■□□□□ 0.31
CDC42-203ENST00000400259 TNNT3P45378 269 aaPredicted RBP17■□□□□ 0.31
CDC42-203ENST00000400259 DNA2P51530 1060 aa17■□□□□ 0.31
CDC42-203ENST00000400259 EPHB4P54760 987 aa17■□□□□ 0.31
CDC42-203ENST00000400259 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
CDC42-203ENST00000400259 EMBQ6PCB8 327 aa17■□□□□ 0.31
CDC42-203ENST00000400259 CYFIP1Q7L576 1253 aa17■□□□□ 0.31
CDC42-203ENST00000400259 DAAM2Q86T65 1068 aa17■□□□□ 0.31
CDC42-203ENST00000400259 PALB2Q86YC2 1186 aa17■□□□□ 0.31
CDC42-203ENST00000400259 METTL13Q8N6R0 699 aa17■□□□□ 0.31
CDC42-203ENST00000400259 SCFD2Q8WU76 684 aa17■□□□□ 0.31
CDC42-203ENST00000400259 SLC20A1Q8WUM9 679 aa17■□□□□ 0.31
CDC42-203ENST00000400259 SEMA4DQ92854 862 aa17■□□□□ 0.31
CDC42-203ENST00000400259 KREMEN1Q96MU8 473 aa17■□□□□ 0.31
CDC42-203ENST00000400259 NIFKQ9BYG3 293 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 ZKSCAN7Q9P0L1 754 aaPredicted RBP17■□□□□ 0.31
CDC42-203ENST00000400259 A0A0G2JLL6 359 aaPredicted RBP17■□□□□ 0.31
CDC42-203ENST00000400259 HNRNPDLO14979 420 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 MFAP3P55082 362 aa17■□□□□ 0.31
CDC42-203ENST00000400259 TNNC1P63316 161 aa17■□□□□ 0.31
CDC42-203ENST00000400259 MRPS25P82663 173 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 SLC7A5Q01650 507 aa17■□□□□ 0.31
CDC42-203ENST00000400259 FSTL1Q12841 308 aa17■□□□□ 0.31
CDC42-203ENST00000400259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17■□□□□ 0.311e-7■■■■□ 25.8
CDC42-203ENST00000400259 PRRT2Q7Z6L0 340 aaPredicted RBP17■□□□□ 0.31
CDC42-203ENST00000400259 RHOT2Q8IXI1 618 aa17■□□□□ 0.31
CDC42-203ENST00000400259 GSPT2Q8IYD1 628 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 HELQQ8TDG4 1101 aa17■□□□□ 0.31
CDC42-203ENST00000400259 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
CDC42-203ENST00000400259 DCPSQ96C86 337 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 CEP89Q96ST8 783 aa17■□□□□ 0.31
CDC42-203ENST00000400259 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
CDC42-203ENST00000400259 TAS2R14Q9NYV8 317 aa17■□□□□ 0.31
CDC42-203ENST00000400259 NOCTQ9UK39 431 aaKnown RBP17■□□□□ 0.31
CDC42-203ENST00000400259 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
CDC42-203ENST00000400259 IRF6O14896 467 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 BUB1BO60566 1050 aaPredicted RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 CYP2C19P33261 490 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 MTERF2Q49AM1 385 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 SULF1Q8IWU6 871 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 IFT20Q8IY31 132 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 FBXL13Q8NEE6 735 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 EPS8L1Q8TE68 723 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 CAVIN3Q969G5 261 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 CCDC127Q96BQ5 260 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.99■□□□□ 0.312e-8■■■□□ 15.4
CDC42-203ENST00000400259 SPATC1LQ9H0A9 340 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 PORCNQ9H237 461 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 OSGEPQ9NPF4 335 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 AMFRQ9UKV5 643 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 TTC7AQ9ULT0 858 aaPredicted RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 CLSTN1O94985 981 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 PIGRP01833 764 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 GZMAP12544 262 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 POLGP54098 1239 aaPredicted RBP16.99■□□□□ 0.31
CDC42-203ENST00000400259 CLDN10P78369 228 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 NNTQ13423 1086 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 HSP90B2PQ58FF3 399 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 CNKSR2Q8WXI2 1034 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 KAT5Q92993 513 aa16.99■□□□□ 0.31
CDC42-203ENST00000400259 ARHGEF26Q96DR7 871 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms