RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 SPDL1Q96EA4 605 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TMEM60Q9H2L4 133 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SLITRK6Q9H5Y7 841 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZNF302Q9NR11 478 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SNX24Q9Y343 169 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PLXNA1Q9UIW2 1896 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CADP27708 2225 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RFX7Q2KHR2 1363 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PLEKHG2Q9H7P9 1386 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 STXBP3O00186 592 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ORC4O43929 436 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 LDHAP00338 332 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 MYBP10242 640 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MAP2K2P36507 400 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 FXR1P51114 621 aaKnown RBP eCLIP3.47□□□□□ -1.85
KNL1-202ENST00000399668 JAK3P52333 1124 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 IL1RL1Q01638 556 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZNF543Q08ER8 600 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SURF1Q15526 300 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 E2F4Q16254 413 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 INTS5Q6P9B9 1019 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 LDHDQ86WU2 507 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RHOT2Q8IXI1 618 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SP8Q8IXZ3 490 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SIX6OS1Q8N1H7 587 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZNF564Q8TBZ8 553 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ATP6V1E2Q96A05 226 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TMEM143Q96AN5 459 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 KLHL29Q96CT2 875 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PI4K2AQ9BTU6 479 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CCSER1Q9C0I3 900 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TAF1DQ9H5J8 278 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 SAYSD1Q9NPB0 183 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RNF14Q9UBS8 474 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 DCTN4Q9UJW0 460 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 LRFN2Q9ULH4 789 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 G3BP2Q9UN86 482 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 SUGT1Q9Y2Z0 365 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CNOT1A5YKK6 2376 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 LAMB1P07942 1786 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SETD1AO15047 1707 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 HMGB1P1B2RPK0 211 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 GOLGA8RI6L899 631 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MAPK13O15264 365 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SART1O43290 800 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 LPXNO60711 386 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 NDUFB10O96000 172 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 KRT14P02533 472 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ADRA2BP18089 450 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 KLRK1P26718 216 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 GPC3P51654 580 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 HMGCS2P54868 508 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PLA2G4FQ68DD2 849 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 LMBRD2Q68DH5 695 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 RFX8Q6ZV50 586 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 C16orf86Q6ZW13 317 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZC3H18Q86VM9 953 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 PDIK1LQ8N165 341 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 KIF12Q96FN5 646 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CYTH2Q99418 400 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 REEP2Q9BRK0 252 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 FSD1LQ9BXM9 530 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 DDX47Q9H0S4 455 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 FAM217BQ9NTX9 383 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 KLHL8Q9P2G9 620 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ADGRG1Q9Y653 693 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 DOT1LQ8TEK3 1739 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PNPLA7Q6ZV29 1317 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MYO3BQ8WXR4 1341 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SPDYE2BA6NHP3 402 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CYP26A1O43174 497 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PPFIA4O75335 1185 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CAMTA2O94983 1202 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MMEP08473 750 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SPDYE6P0CI01 402 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SCP2P22307 547 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RFX1P22670 979 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ADCY2Q08462 1091 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RBBP5Q15291 538 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 FAM102AQ5T9C2 384 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 STRIP1Q5VSL9 837 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 E4F1Q66K89 784 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 RNF149Q8NC42 400 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PIP4K2CQ8TBX8 421 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 NSUN6Q8TEA1 469 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 C1orf54Q8WWF1 131 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 GBP5Q96PP8 586 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ADAM33Q9BZ11 813 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PITPNM3Q9BZ71 974 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 POLR3FQ9H1D9 316 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 MRPL46Q9H2W6 279 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ATP6V0A4Q9HBG4 840 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 FBXO28Q9NVF7 368 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MAD2L2Q9UI95 211 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TLK1Q9UKI8 766 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TPX2Q9ULW0 747 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 PFDN6O15212 129 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SRGAP2BP0DMP2 458 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 LCP1P13796 627 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SPARCL1Q14515 664 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms