RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNRF3Q9ULT6 936 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 PCDHGC5Q9Y5F6 944 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RREB1Q92766 1687 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 COL5A3P25940 1745 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 A6NLC8 198 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CASQ2O14958 399 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RANBP6O60518 1105 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 PQBP1O60828 265 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 PDE8BO95263 885 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 DHRS4L1P0CG22 281 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 THEGLP0DJG4 465 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 FGFR4P22455 802 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CCND1P24385 295 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 PNOCQ13519 176 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SNW1Q13573 536 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 LLGL1Q15334 1064 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF423Q2M1K9 1284 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CCDC38Q502W7 563 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 UTP14CQ5TAP6 766 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SLC30A6Q6NXT4 461 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 IL17RDQ8NFM7 739 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 NCOA7Q8NI08 942 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SMARCC2Q8TAQ2 1214 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF304Q9HCX3 659 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SLC4A4Q9Y6R1 1079 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RGPD3A6NKT7 1758 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RGPD4Q7Z3J3 1758 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 AFDNP55196 1824 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RIC1Q4ADV7 1423 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 GOLGA8AA7E2F4 631 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 B4DLN1 442 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 DOK2O60496 412 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SOCS5O75159 536 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SNX4O95219 450 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 STAU1O95793 577 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 APOA4P06727 396 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RPIAP49247 311 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF75DP51815 510 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 POLR2FP61218 127 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 USP49Q70CQ1 688 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 AMIGO3Q86WK7 504 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 COLGALT2Q8IYK4 626 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 TRMT44Q8IYL2 757 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RBBP8NLQ8NC74 664 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 UTP15Q8TED0 518 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 FERMT2Q96AC1 680 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 UIMC1Q96RL1 719 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZWILCHQ9H900 591 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 ARFGAP3Q9NP61 516 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 HPF1Q9NWY4 346 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 SH3BGRL2Q9UJC5 107 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 BTBD18B2RXH4 712 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA12O60330 932 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 KPNA6O60684 536 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 HRGP04196 525 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PBLDP30039 288 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 MAGEA8P43361 318 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 DRG2P55039 364 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 SMAD4Q13485 552 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 SEMA5AQ13591 1074 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 ZRSR1Q15695 479 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PPP4R3BQ5MIZ7 849 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 POMZP3Q6PJE2 187 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 SYNE3Q6ZMZ3 975 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 RABGGTAQ92696 567 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 SLF1Q9BQI6 1058 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 C2orf40Q9H1Z8 148 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 XAB2Q9HCS7 855 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 WASH6PQ9NQA3 447 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 AASSQ9UDR5 926 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA8Q9Y5G5 932 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA7Q9Y5G6 932 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA6Q9Y5G7 932 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 A0A1W2PQH9 124 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 CCDC66A2RUB6 948 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 H0Y626 953 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 NEMFO60524 1076 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 USO1O60763 962 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 MTRF1O75570 445 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 CNTFP26441 200 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 NR1H2P55055 460 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 NLRP5P59047 1200 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 BTKQ06187 659 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 FAM47AQ5JRC9 791 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 DGKKQ5KSL6 1271 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 SNAP47Q5SQN1 464 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 KRT40Q6A162 431 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 KCNV1Q6PIU1 500 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 LRRC69Q6ZNQ3 347 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 SRGAP1Q7Z6B7 1085 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 REM2Q8IYK8 340 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 DCLK2Q8N568 766 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 TATDN2Q93075 761 aa6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 DDX19AQ9NUU7 478 aaKnown RBP6.77□□□□□ -1.33
TRAPPC13-202ENST00000399438 CAPN9O14815 690 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms