RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SCFD1Q8WVM8 642 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZBTB45Q96K62 511 aaPredicted RBP13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TRAIPQ9BWF2 469 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 PTPRHQ9HD43 1115 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CHST12Q9NRB3 414 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 EXOC1Q9NV70 894 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 KCNG1Q9UIX4 513 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
HLA-DQB1-203ENST00000399082 GBF1Q92538 1859 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MEIS3P2A8K0S8 358 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZBBXA8MT70 800 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 H0YCG3 227 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 PRPF6O94906 941 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 BMT2Q1RMZ1 405 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 NOTUMQ6P988 496 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ECHDC2Q86YB7 292 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SMG8Q8ND04 991 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 HVCN1Q96D96 273 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 RNPC3Q96LT9 517 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 GSDMAQ96QA5 445 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MRPL4Q9BYD3 311 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MAN1B1Q9UKM7 699 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TNFSF13BQ9Y275 285 aa13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-203ENST00000399082 A0A0U1RQF3 1178 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ANKRD63C9JTQ0 380 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 EIF3DO15371 548 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 EFCAB14O75071 495 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 NPTXRO95502 500 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MBD3O95983 291 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SCP2P22307 547 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TWF2Q6IBS0 349 aaKnown RBP13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZPBP2Q6X784 338 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 FAM43BQ6ZT52 329 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SMYD4Q8IYR2 804 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CEP120Q8N960 986 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CCDC51Q96ER9 411 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CDT1Q9H211 546 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 RC3H2Q9HBD1 1191 aaKnown RBP13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TMEM63CQ9P1W3 806 aa13.62□□□□□ -0.23
HLA-DQB1-203ENST00000399082 GRXCR1A8MXD5 290 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 N4BP3O15049 544 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MEFVO15553 781 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TGFB1I1O43294 461 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 FAM189A1O60320 539 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZNF623O75123 536 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZSCAN20P17040 1043 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ADSSP30520 456 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 STRN3Q13033 797 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 PSMD2Q13200 908 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ALCAMQ13740 583 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 RBM43Q6ZSC3 357 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TOP1MTQ969P6 601 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CCDC34Q96HJ3 373 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ACCSQ96QU6 501 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 KIAA1468Q9P260 1216 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 HES2Q9Y543 173 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 STYXL1Q9Y6J8 313 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SLC4A7Q9Y6M7 1214 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 UBE4BO95155 1302 aa13.61□□□□□ -0.23
HLA-DQB1-203ENST00000399082 BIN1O00499 593 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TOM1L1O75674 476 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SMC2O95347 1197 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 AMHP03971 560 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 FGFR1P11362 822 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 KCNJ6P48051 423 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 GATMP50440 423 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MCL1Q07820 350 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MORC3Q14149 939 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ZBTB41Q5SVQ8 909 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ISM2Q6H9L7 571 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 MPZL3Q6UWV2 235 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 NPAS4Q8IUM7 802 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 NELFCDQ8IXH7 590 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 TMEM192Q8IY95 271 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 LPPQ93052 612 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 CXCL16Q9H2A7 254 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 KCTD10Q9H3F6 313 aa13.6□□□□□ -0.23
HLA-DQB1-203ENST00000399082 ELAC1Q9H777 363 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms