RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CYP27A1Q02318 531 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 IMPG1Q17R60 797 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 AGGF1Q8N302 714 aaeCLIP8.87□□□□□ -0.993e-6■■□□□ 12.5
SPTLC3-201ENST00000399002 ATL2Q8NHH9 583 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 PARD3BQ8TEW8 1205 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 NCLNQ969V3 563 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 PRKAG2Q9UGJ0 569 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 INTUQ9ULD6 942 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 SNX24Q9Y343 169 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 GOLGA8IPA6NC78 632 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 H2AFYO75367 372 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 BYSLQ13895 437 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 INPP5AQ14642 412 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 RNF219Q5W0B1 726 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 GRAMD4Q6IC98 578 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 RWDD4Q6NW29 188 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 CCDC137Q6PK04 289 aaKnown RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 C16orf89Q6UX73 402 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 TBC1D1Q86TI0 1168 aaPredicted RBP8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 RAB42Q8N4Z0 105 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 TNIP2Q8NFZ5 429 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 EPN3Q9H201 632 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 KIF17Q9P2E2 1029 aa8.87□□□□□ -0.99
SPTLC3-201ENST00000399002 CFLARO15519 480 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ZNF18P17022 549 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 STAT3P40763 770 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 KCNQ4P56696 695 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 TTLL6Q8N841 843 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ASAP3Q8TDY4 903 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 STK33Q9BYT3 514 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 FRMD8Q9BZ67 464 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 KDM4CQ9H3R0 1056 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 DCP1AQ9NPI6 582 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ANLNQ9NQW6 1124 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 CHCHD3Q9NX63 227 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 PSD3Q9NYI0 1048 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 FBXO2Q9UK22 296 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 CRB1P82279 1406 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 PRR29P0C7W0 189 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 HNRNPH2P55795 449 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ILF2Q12905 390 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 MYLK4Q86YV6 388 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 TRIM59Q8IWR1 403 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 COG1Q8WTW3 980 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 MINPP1Q9UNW1 487 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 E9PCH4 1651 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 EIF2AK2P19525 551 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 HOXA13P31271 388 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 PEX19P40855 299 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 TMEM270Q6UE05 265 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 RASGRP2Q7LDG7 609 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ZC3H18Q86VM9 953 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ADGRF4Q8IZF3 695 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 EIF2AK1Q9BQI3 630 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 PHF20Q9BVI0 1012 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ARL2BPQ9Y2Y0 163 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 DENND3A2RUS2 1198 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 IL18RAPO95256 599 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 SRGNP10124 158 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 RALAP11233 206 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 IL10P22301 178 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ATP6V1E1P36543 226 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 PPARDQ03181 441 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 HP1BP3Q5SSJ5 553 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 DAB2IPQ5VWQ8 1189 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 POTEAQ6S8J7 498 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 NEDD1Q8NHV4 660 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 RMDN3Q96TC7 470 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 TRIM54Q9BYV2 358 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ACAD9Q9H845 621 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 QTRT2Q9H974 415 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 GTSE1Q9NYZ3 720 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 CFAP65Q6ZU64 1925 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 SYCE1LA8MT33 242 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 E9PMD0 336 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ECM2O94769 699 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 ANP32DO95626 131 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 KRT4P19013 534 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 RFC5P40937 340 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 EXOSC10Q01780 885 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 TSTA3Q13630 321 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 IZUMO3Q5VZ72 239 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 RGS9BPQ6ZS82 235 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 EFL1Q7Z2Z2 1120 aaKnown RBP8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 NUDCD3Q8IVD9 361 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 SP8Q8IXZ3 490 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 FIS1Q9Y3D6 152 aa8.86□□□□□ -0.99
SPTLC3-201ENST00000399002 MYO1CO00159 1063 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 ECE2O60344 883 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 RECQLP46063 649 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 PSMC1P62191 440 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 PDIA2Q13087 525 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 P3H1Q32P28 736 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SAAL1Q96ER3 474 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SP110Q9HB58 689 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 BATF3Q9NR55 127 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 SNX12Q9UMY4 172 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 WDR91A4D1P6 747 aa8.85□□□□□ -0.99
SPTLC3-201ENST00000399002 TRIM49BA6NDI0 452 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms