RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 KLC2Q9H0B6 622 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 SPON1Q9HCB6 807 aa15.18■□□□□ 0.02
PCDHGA11-201ENST00000398587 VSNL1P62760 191 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 DHX34Q14147 1143 aaKnown RBP15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 FAM163AQ96GL9 167 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 EFCC1Q9HA90 598 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 UVRAGQ9P2Y5 699 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 ICAM1P05362 532 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 CLTAP09496 248 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 SREBF1P36956 1147 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 TMEM143Q96AN5 459 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 ABT1Q9ULW3 272 aaKnown RBP15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 PLAGL2Q9UPG8 496 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 ARHGAP42A6NI28 874 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 P4HA2O15460 535 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 SCP2P22307 547 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 LMBRD2Q68DH5 695 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 HVCN1Q96D96 273 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 VCXQ9H320 206 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 FAM217BQ9NTX9 383 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
PCDHGA11-201ENST00000398587 M0QYV0 167 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 TAP1Q03518 808 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 NXNQ6DKJ4 435 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 PHLDB3Q6NSJ2 640 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 PCGF5Q86SE9 256 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 MORC2Q9Y6X9 1032 aaPredicted RBP15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 IQANK1A0A1B0GTG1 560 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 PRKCEQ02156 737 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 CCDC38Q502W7 563 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 CCDC137Q6PK04 289 aaKnown RBP15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 RAPH1Q70E73 1250 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 CHST13Q8NET6 341 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■■■■ 61.7
PCDHGA11-201ENST00000398587 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 CPSF3Q9UKF6 684 aaKnown RBP15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SH3BP5O60239 455 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 PLA2G4FQ68DD2 849 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 TTI2Q6NXR4 508 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 EFCAB13Q8IY85 973 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 ANKS1AQ92625 1134 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 IL17RAQ96F46 866 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SMARCAD1Q9H4L7 1026 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 IL17RBQ9NRM6 502 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SUCLA2Q9P2R7 463 aaPredicted RBP15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 AK9Q5TCS8 1911 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 TYW5A2RUC4 315 aaKnown RBP15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 MUTP22033 750 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 RFC5P40937 340 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SLC1A1P43005 524 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 PDCLQ13371 301 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 SAMD7Q7Z3H4 446 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 TMX2Q9Y320 296 aa15.16■□□□□ 0.02
PCDHGA11-201ENST00000398587 A0A087WUV0 522 aaPredicted RBP15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 DDTLA6NHG4 134 aaPredicted RBP15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 GSTA1P08263 222 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 GSTA2P09210 222 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 ACOT2P49753 483 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 PMS2P54278 862 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 GYS2P54840 703 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 EMC2Q15006 297 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 KLHDC7AQ5VTJ3 777 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 TTC25Q96NG3 672 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 LRRC1Q9BTT6 524 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 DDX56Q9NY93 547 aaKnown RBP15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 TRIM10Q9UDY6 481 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 TACC3Q9Y6A5 838 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 MYO5BQ9ULV0 1848 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 KRT37O76014 449 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 SLC25A27O95847 323 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 GMCL1P1Q8NEA9 526 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 GPRASP2Q96D09 838 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 PCSK1NQ9UHG2 260 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 AMACRQ9UHK6 382 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 TLK1Q9UKI8 766 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 NR1H3Q13133 447 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 PSMD6Q15008 389 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 GOLGA8CPA6NN73 597 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 MED24O75448 989 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 NPEPPSP55786 919 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 IRX4P78413 519 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 ASPHQ12797 758 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 FIGNQ5HY92 759 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 SCYL3Q8IZE3 742 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 TAAR1Q96RJ0 339 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 C17orf75Q9HAS0 396 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 CYP26B1Q9NR63 512 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 DONSONQ9NYP3 566 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 STAP1Q9ULZ2 295 aa15.15■□□□□ 0.02
PCDHGA11-201ENST00000398587 IGSF9BQ9UPX0 1349 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms