RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CFHR5Q9BXR6 569 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 ADKP55263 362 aaKnown RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 RRAGAQ7L523 313 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 UBL4BQ8N7F7 174 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 LACRTQ9GZZ8 138 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 XPNPEP1Q9NQW7 623 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 C1orf112Q9NSG2 853 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 FBXO28Q9NVF7 368 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 LRRC53A6NM62 1247 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TLR2O60603 784 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 STBD1O95210 358 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 P4HA1P13674 534 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 CDH5P33151 784 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 ACTR2P61160 394 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 COPS2P61201 443 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 IQSEC1Q6DN90 963 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TPH2Q8IWU9 490 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 GGA2Q9UJY4 613 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TNFSF13BQ9Y275 285 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 DCAF8L1A6NGE4 600 aa6.34□□□□□ -1.4
PTPRD-206ENST00000397617 K7ERI5 159 aa6.34□□□□□ -1.4
PTPRD-206ENST00000397617 ASS1P00966 412 aaKnown RBP6.34□□□□□ -1.4
PTPRD-206ENST00000397617 PON1P27169 355 aa6.34□□□□□ -1.4
PTPRD-206ENST00000397617 EIF4A3P38919 411 aaKnown RBP6.34□□□□□ -1.4
PTPRD-206ENST00000397617 RPS6KA1Q15418 735 aa6.34□□□□□ -1.4
PTPRD-206ENST00000397617 PSTKQ8IV42 348 aaKnown RBP6.34□□□□□ -1.4
PTPRD-206ENST00000397617 C12orf50Q8NA57 414 aaPredicted RBP6.34□□□□□ -1.4
PTPRD-206ENST00000397617 CCDC26Q8TAB7 109 aa6.34□□□□□ -1.4
PTPRD-206ENST00000397617 CPVLQ9H3G5 476 aa6.34□□□□□ -1.4
PTPRD-206ENST00000397617 CLRN2A0PK11 232 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 NFIBO00712 420 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF862O60290 1169 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 OATP04181 439 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CDR2Q01850 454 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 ANO5Q75V66 913 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 COG1Q8WTW3 980 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 MTUS1Q9ULD2 1270 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 ZBTB12Q9Y330 459 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 REXO2Q9Y3B8 237 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 ADAMTSL1Q8N6G6 1762 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 PPFIA3O75145 1194 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CALB1P05937 261 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 DESP17661 470 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 VAMP7P51809 220 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 PMS1P54277 932 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 PTK2Q05397 1052 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 LRRC52Q8N7C0 313 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 LRRC15Q8TF66 581 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 HES6Q96HZ4 224 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 WDR24Q96S15 920 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 TBCBQ99426 244 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CYP26B1Q9NR63 512 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 COL11A1P12107 1806 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 GPD1LQ8N335 351 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CEP170P1Q96L14 293 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 WNT8AQ9H1J5 351 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 FZD8Q9H461 694 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 MROH7Q68CQ1 1323 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 HNRNPDLO14979 420 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 NPTX2P47972 431 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 STRN3Q13033 797 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 SNRNP35Q16560 246 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 TDRD12Q587J7 1177 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 C4orf22Q6V702 233 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CLEC10AQ8IUN9 316 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CEP295NLQ96MC4 621 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 PCMTD1Q96MG8 357 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 HIP1RO75146 1068 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 STAT5BP51692 787 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 HMGCS2P54868 508 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CENPCQ03188 943 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 RRP1BQ14684 758 aaKnown RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 DUSP28Q4G0W2 176 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 NBPF12Q5TAG4 269 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 SMYD4Q8IYR2 804 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 FAM71BQ8TC56 605 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 RUSC1Q9BVN2 902 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 FAM114A2Q9NRY5 505 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 FAM207AQ9NSI2 230 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 PCDHA13Q9Y5I0 950 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 BHMG1C9JSJ3 638 aaPredicted RBP6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CCNE2O96020 404 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CHRNA3P32297 505 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 KCNMA1Q12791 1236 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 BIRC3Q13489 604 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 WDR49Q8IV35 697 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 NME8Q8N427 588 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 SPATA4Q8NEY3 305 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
PTPRD-206ENST00000397617 MCF2P10911 925 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 MTA1Q13330 715 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 TMEM132BQ14DG7 1078 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 XKR9Q5GH70 373 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 RELL1Q8IUW5 271 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms