RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 SNX27Q96L92 541 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 NAP1L4Q99733 375 aaKnown RBP13.32□□□□□ -0.28
SYNE4-203ENST00000397428 RNF39Q9H2S5 420 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 CHST7Q9NS84 486 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 RGL1Q9NZL6 768 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
SYNE4-203ENST00000397428 CCDC195A0A1B0GUA6 201 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 ARL5CA6NH57 179 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 TEX28O15482 410 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 N4BP1O75113 896 aaKnown RBP13.31□□□□□ -0.28
SYNE4-203ENST00000397428 MXD4Q14582 209 aaPredicted RBP13.31□□□□□ -0.28
SYNE4-203ENST00000397428 EMC2Q15006 297 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 GPR65Q8IYL9 337 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 HDAC7Q8WUI4 952 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 DYDC2Q96IM9 177 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 HSD17B14Q9BPX1 270 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 HERC2P3Q9BVR0 1158 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 MFSD1Q9H3U5 465 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
SYNE4-203ENST00000397428 GJB4Q9NTQ9 266 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 DPP7Q9UHL4 492 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 DUSP12Q9UNI6 340 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 IPPQ9Y573 584 aa13.31□□□□□ -0.28
SYNE4-203ENST00000397428 PRR23AA6NEV1 266 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 CCNT1O60563 726 aaKnown RBP13.3□□□□□ -0.28
SYNE4-203ENST00000397428 TSPAN1O60635 241 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 LYPLA2O95372 231 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
SYNE4-203ENST00000397428 ADH1AP07327 375 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 AOC1P19801 751 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 ARL2P36404 184 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 DSG1Q02413 1049 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 SCRN1Q12765 414 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 CTTNQ14247 550 aaKnown RBP13.3□□□□□ -0.28
SYNE4-203ENST00000397428 EARS2Q5JPH6 523 aaKnown RBP13.3□□□□□ -0.28
SYNE4-203ENST00000397428 CWF19L1Q69YN2 538 aaKnown RBP13.3□□□□□ -0.28
SYNE4-203ENST00000397428 LILRA6Q6PI73 481 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 SLFN12Q8IYM2 578 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 SLC44A3Q8N4M1 653 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 GSTCDQ8NEC7 633 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 CCDC51Q96ER9 411 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 GAD1Q99259 594 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 LXNQ9BS40 222 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
SYNE4-203ENST00000397428 CSRNP2Q9H175 543 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 WNT16Q9UBV4 365 aa13.3□□□□□ -0.28
SYNE4-203ENST00000397428 WDR87Q6ZQQ6 2873 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 C2CD2LO14523 706 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 PFKFB2O60825 505 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 CDKL5O76039 1030 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 ERLIN2O94905 339 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 URODP06132 367 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 XRCC6P12956 609 aaKnown RBP eCLIP13.29□□□□□ -0.28
SYNE4-203ENST00000397428 XBP1P17861 261 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 OR1G1P47890 313 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 GLUD2P49448 558 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 AK2P54819 239 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
SYNE4-203ENST00000397428 AMHR2Q16671 573 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 NOTUMQ6P988 496 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 PIK3AP1Q6ZUJ8 805 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 TPH2Q8IWU9 490 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 NXPE3Q969Y0 559 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 ZNF707Q96C28 371 aaPredicted RBP13.29□□□□□ -0.28
SYNE4-203ENST00000397428 MTRQ99707 1265 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 RTP3Q9BQQ7 232 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 COLEC11Q9BWP8 271 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 NFKBIZQ9BYH8 718 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 MAN1C1Q9NR34 630 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 ANKEF1Q9NU02 776 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 PCDHA12Q9UN75 941 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 GIT1Q9Y2X7 761 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 HES2Q9Y543 173 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 VPS13AQ96RL7 3174 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
SYNE4-203ENST00000397428 A0A1B0GUA9 196 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 MARCH6O60337 910 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 ARF4P18085 180 aaPredicted RBP13.28□□□□□ -0.28
SYNE4-203ENST00000397428 CYP4A11Q02928 519 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 MBTD1Q05BQ5 628 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 TFDP1Q14186 410 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 NCAPH2Q6IBW4 605 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 ELMSAN1Q6PJG2 1045 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 FRMD5Q7Z6J6 570 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 CCDC105Q8IYK2 499 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 DTWD2Q8NBA8 298 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 FLCNQ8NFG4 579 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 CPB2Q96IY4 423 aa13.28□□□□□ -0.28
SYNE4-203ENST00000397428 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms