RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 DHX38Q92620 1227 aaKnown RBP17.12■□□□□ 0.33
ATP2A3-206ENST00000397043 SEC16BQ96JE7 1060 aa17.12■□□□□ 0.33
ATP2A3-206ENST00000397043 MLXIPLQ9NP71 852 aa17.12■□□□□ 0.33
ATP2A3-206ENST00000397043 TOPORSQ9NS56 1045 aaPredicted RBP17.12■□□□□ 0.33
ATP2A3-206ENST00000397043 TMX2Q9Y320 296 aa17.12■□□□□ 0.33
ATP2A3-206ENST00000397043 ACSL3O95573 720 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 CHN1P15882 459 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 SSTR3P32745 418 aaPredicted RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 RPL21P46778 160 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 SPATS2Q86XZ4 545 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 CCDC13Q8IYE1 715 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 EPS8L3Q8TE67 593 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 PCDHB18PQ96TA0 734 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 DMAC2Q9NW81 257 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 NCANO14594 1321 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 PRELID2Q8N945 189 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 ZNF564Q8TBZ8 553 aaPredicted RBP17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 MYH11P35749 1972 aa17.11■□□□□ 0.33
ATP2A3-206ENST00000397043 ENTPD3O75355 529 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 DUPD1Q68J44 220 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 GPATCH11Q8N954 259 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 FAM118BQ9BPY3 351 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 ZSWIM1Q9BR11 485 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 PI4K2AQ9BTU6 479 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 MTUS1Q9ULD2 1270 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 CLDN3O15551 220 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 CPP00450 1065 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 VCAM1P19320 739 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 ZNF131P52739 623 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 LRRC14Q15048 493 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 TTC27Q6P3X3 843 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 KCNV1Q6PIU1 500 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 ZNF341Q9BYN7 854 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 PABPC3Q9H361 631 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 TMEM206Q9H813 350 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 RAVER2Q9HCJ3 691 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 GGT7Q9UJ14 662 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 KIAA0391O15091 583 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 PHF2O75151 1096 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 CALCOCO2Q13137 446 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 MTMR1Q13613 665 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 AGBL2Q5U5Z8 902 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 EIF1ADQ8N9N8 165 aaKnown RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 RNF25Q96BH1 459 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 TMEM117Q9H0C3 514 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 COL20A1Q9P218 1284 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 CD2APQ9Y5K6 639 aa17.1■□□□□ 0.33
ATP2A3-206ENST00000397043 YWHABP31946 246 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 KIF22Q14807 665 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 DAB2IPQ5VWQ8 1189 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 BICD1Q96G01 975 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 SCLT1Q96NL6 688 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 TAOK3Q9H2K8 898 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 INTS9Q9NV88 658 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 USP20Q9Y2K6 914 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 RARRES1P49788 294 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 SPRED3Q2MJR0 410 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 HERC5Q9UII4 1024 aaKnown RBP17.09■□□□□ 0.33
ATP2A3-206ENST00000397043 ANKRD63C9JTQ0 380 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 PPFIA2O75334 1257 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 EIF3BP55884 814 aaKnown RBP17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 RASA3Q14644 834 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 LMO3Q8TAP4 145 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 EPS8L1Q8TE68 723 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 ATG4AQ8WYN0 398 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 PRMT1Q99873 361 aaKnown RBP17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 CD248Q9HCU0 757 aa17.08■□□□□ 0.33
ATP2A3-206ENST00000397043 YDJCA8MPS7 323 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 RTN2O75298 545 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 ADRB2P07550 413 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 CHRNA3P32297 505 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 PDE6CP51160 858 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 DHX34Q14147 1143 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 ZDHHC14Q8IZN3 488 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 POMGNT1Q8WZA1 660 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 XPO6Q96QU8 1125 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 KCNK9Q9NPC2 374 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 DIS3Q9Y2L1 958 aaKnown RBP17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 FAM187AA6NFU0 413 aa17.08■□□□□ 0.32
ATP2A3-206ENST00000397043 MIF4GDA9UHW6 222 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms