RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 SP110Q9HB58 689 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 SPATA2Q9UM82 520 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 ARL2BPQ9Y2Y0 163 aa10.92□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC41Q15345 812 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 FBXW10Q5XX13 1052 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 SDR42E1Q8WUS8 393 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 TRIM63Q969Q1 353 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 SCN3BQ9NY72 215 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 C16orf72Q14CZ0 275 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 VPS50Q96JG6 964 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 RPAP3Q9H6T3 665 aaPredicted RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 MYO5CQ9NQX4 1742 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 PDZK1P1A8MUH7 402 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 SLC16A1P53985 500 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 HPCAP84074 193 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 GRID2IPA4D2P6 1211 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 ATP6V1B1P15313 513 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 TTC33Q6PID6 262 aaPredicted RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 CNDP1Q96KN2 507 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 PARVBQ9HBI1 364 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 MFAP3LO75121 409 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 UBTFL6P0CB48 400 aaPredicted RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 MSTO1Q9BUK6 570 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 UNC45AQ9H3U1 944 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 DNALI1O14645 258 aaPredicted RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 PLCG1P19174 1290 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 CTSWP56202 376 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 ITPRIPL1Q6GPH6 555 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 TTC13Q8NBP0 860 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 PDE4DIPQ5VU43 2346 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 FANCAO15360 1455 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 PDE5AO76074 875 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 COG2Q14746 738 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 SURF1Q15526 300 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 HEATR6Q6AI08 1181 aaKnown RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 CC2D1AQ6P1N0 951 aaPredicted RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 FASTKD5Q7L8L6 764 aaKnown RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 GPR141Q7Z602 305 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 APPL2Q8NEU8 664 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 GLMNQ92990 594 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 IMPAD1Q9NX62 359 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 CDYLQ9Y232 598 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 ZNF839A8K0R7 811 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 ELF1P32519 619 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 ATAD3BQ5T9A4 648 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 MICU2Q8IYU8 434 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 RUBCNQ92622 972 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 OSBPL9Q96SU4 736 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 MRPL39Q9NYK5 338 aaKnown RBP10.91□□□□□ -0.66
COL4A4-201ENST00000396625 SNX24Q9Y343 169 aa10.91□□□□□ -0.66
COL4A4-201ENST00000396625 LRRIQ3A6PVS8 624 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 FAM107AO95990 144 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 PDIA2Q13087 525 aaKnown RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 DNAL1Q4LDG9 190 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 AFG1LQ8WV93 481 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 DNAJC9Q8WXX5 260 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 C20orf96Q9NUD7 363 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 ASNSD1Q9NWL6 643 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 DPP9Q86TI2 863 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 OR6P1Q8NGX9 317 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 DFFAO00273 331 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 STX3Q13277 289 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC14Q15048 493 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 OR8H2Q8N162 312 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 KIFC1Q9BW19 673 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 HEMGNQ9BXL5 484 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 MYH13Q9UKX3 1938 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 MIF4GDA9UHW6 222 aaKnown RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 ATP5JP18859 108 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 FGFR4P22455 802 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 SLFN12LQ6IEE8 588 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 C19orf18Q8NEA5 215 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 BIRC5O15392 142 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 NPM3O75607 178 aaKnown RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 GCKRQ14397 625 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 CMTM5Q96DZ9 223 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 KRCC1Q9NPI7 259 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 TEX14Q8IWB6 1497 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 CCND1P24385 295 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
COL4A4-201ENST00000396625 TRADDQ15628 312 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 ASPRV1Q53RT3 343 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 NFRKBQ6P4R8 1299 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 LRRC31Q6UY01 552 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 STON1Q9Y6Q2 735 aa10.9□□□□□ -0.66
COL4A4-201ENST00000396625 USP17L12C9JPN9 530 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 USP17L21D6R901 530 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 HSPA13P48723 471 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 PWP1Q13610 501 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 DCAF4L1Q3SXM0 396 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 KRT73Q86Y46 540 aa10.9□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms