RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NOTUMQ6P988 496 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 SIX5Q8N196 739 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 DTWD2Q8NBA8 298 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 ZSWIM4Q9H7M6 989 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 ZSWIM6Q9HCJ5 1215 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 MAN1C1Q9NR34 630 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 CCDC195A0A1B0GUA6 201 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 CCDC194A0A1B0GVG4 234 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 B4GALT3O60512 393 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 CDKL5O76039 1030 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 POMCP01189 267 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 SSBP05455 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 YWHABP31946 246 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 GLUD2P49448 558 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 NPEPPSP55786 919 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 CREMQ03060 361 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 ANGPT1Q15389 498 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 UBXN11Q5T124 520 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 NEK8Q86SG6 692 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 FERMT3Q86UX7 667 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 COLGALT2Q8IYK4 626 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 RNF149Q8NC42 400 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 COLEC11Q9BWP8 271 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 DAXXQ9UER7 740 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 VAV3Q9UKW4 847 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 GIT1Q9Y2X7 761 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 CYP46A1Q9Y6A2 500 aa19.53■□□□□ 0.72
EXOSC3-202ENST00000396521 EML1O00423 815 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 TEX28O15482 410 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 MARCH6O60337 910 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 GBP2P32456 591 aaPredicted RBP19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 DSG1Q02413 1049 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 DSC1Q08554 894 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 TFDP1Q14186 410 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 INF2Q27J81 1249 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 KIAA0319Q5VV43 1072 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 SLFN12Q8IYM2 578 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 RNF168Q8IYW5 571 aaPredicted RBP19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 ADSSL1Q8N142 457 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 TMEM143Q96AN5 459 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 MINDY3Q9H8M7 445 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 ZDHHC7Q9NXF8 308 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 IPPQ9Y573 584 aa19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 ZFP37Q9Y6Q3 630 aaPredicted RBP19.52■□□□□ 0.72
EXOSC3-202ENST00000396521 CLUHO75153 1309 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 VPS13AQ96RL7 3174 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 WDR81Q562E7 1941 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 ARL5CA6NH57 179 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 C2CD2LO14523 706 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 PI15O43692 258 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 SLC37A4O43826 429 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 BAG4O95429 457 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 EFEMP2O95967 443 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 SRFP11831 508 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 RFX1P22670 979 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 OR1G1P47890 313 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 PTENP60484 403 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 EMC2Q15006 297 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 NPY5RQ15761 445 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 IFNLR1Q8IU57 520 aaPredicted RBP19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 SMG8Q8ND04 991 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 LXNQ9BS40 222 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 CHST7Q9NS84 486 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 FNIP2Q9P278 1114 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 ZMYM2Q9UBW7 1377 aa19.51■□□□□ 0.71
EXOSC3-202ENST00000396521 PLXNA3P51805 1871 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 STK25O00506 426 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 AFF1P51825 1210 aaKnown RBP19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 TOB2Q14106 344 aaPredicted RBP19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 USP41Q3LFD5 358 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 XKR9Q5GH70 373 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 PHLDB3Q6NSJ2 640 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 SLC44A3Q8N4M1 653 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 SMG7Q92540 1137 aaKnown RBP19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 BORCS6Q96GS4 357 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 MTRQ99707 1265 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 NFKBIZQ9BYH8 718 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 TRIM6Q9C030 488 aaPredicted RBP19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 CSRNP2Q9H175 543 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 MARCH5Q9NX47 278 aa19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 PRG3Q9Y2Y8 225 aaPredicted RBP19.5■□□□□ 0.71
EXOSC3-202ENST00000396521 ID4P47928 161 aa19.49■□□□□ 0.71
EXOSC3-202ENST00000396521 GAD1Q99259 594 aa19.49■□□□□ 0.71
EXOSC3-202ENST00000396521 PIDD1Q9HB75 910 aa19.49■□□□□ 0.71
EXOSC3-202ENST00000396521 CCNT1O60563 726 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 TSPAN1O60635 241 aa19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 LMNAP02545 664 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 ZC3H14Q6PJT7 736 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 ZNF579Q8NAF0 562 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 PHF20Q9BVI0 1012 aa19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 PRKD2Q9BZL6 878 aa19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 NT5C3AQ9H0P0 336 aa19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 WRAP73Q9P2S5 460 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 EP300Q09472 2414 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-202ENST00000396521 DMDP11532 3685 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 INO80B-WBP1J3KQ70 363 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 N4BP1O75113 896 aaKnown RBP19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 DGAT1O75907 488 aa19.47■□□□□ 0.71
EXOSC3-202ENST00000396521 LYPLA2O95372 231 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms