RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GPD1LQ8N335 351 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 ZSWIM2Q8NEG5 633 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 GLT1D1Q96MS3 346 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 ACO2Q99798 780 aaKnown RBP22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 GINS2Q9Y248 185 aa22.28■■□□□ 1.16
VCPKMT-202ENST00000395860 HSPA8P11142 646 aaKnown RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 ITGA7Q13683 1181 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 SRGAP1Q7Z6B7 1085 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 NME8Q8N427 588 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 ZBTB45Q96K62 511 aaPredicted RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 GCOM2Q9BZD3 368 aaPredicted RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 ADAMTS10Q9H324 1103 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 AGO2Q9UKV8 859 aaKnown RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 A0A1W2PQC6 194 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 TTLL13PA6NNM8 815 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 GPR32O75388 356 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 CSDE1O75534 798 aaKnown RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 TOM1L1O75674 476 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 IQCF3P0C7M6 154 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 KCNH2Q12809 1159 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 MTFR1Q15390 333 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 SNRNP35Q16560 246 aaKnown RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 FAM187BQ17R55 369 aa22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 INTS8Q75QN2 995 aaKnown RBP22.27■■□□□ 1.16
VCPKMT-202ENST00000395860 GRIN2DO15399 1336 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 ITIH6Q6UXX5 1313 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 CLDN3O15551 220 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 AFPP02771 609 aaKnown RBP22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 BFSP1Q12934 665 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 CTU1Q7Z7A3 348 aaKnown RBP22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 SLC35C1Q96A29 364 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 PRIMPOLQ96LW4 560 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 FBXL18Q96ME1 805 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 TCHPQ9BT92 498 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 MSTO1Q9BUK6 570 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 KIAA1586Q9HCI6 787 aa22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 PAK6Q9NQU5 681 aaPredicted RBP22.26■■□□□ 1.15
VCPKMT-202ENST00000395860 KBTBD13C9JR72 458 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 B4GALT5O43286 388 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 EXTL3O43909 919 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 LDHAP00338 332 aaKnown RBP22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 CCL5P13501 91 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 HSP90AA2PQ14568 343 aaPredicted RBP22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 ATF7IP2Q5U623 682 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 TSHZ1Q6ZSZ6 1077 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 CBWD2Q8IUF1 395 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 ZNF710Q8N1W2 664 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 PCMTD1Q96MG8 357 aaPredicted RBP22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 ERGIC2Q96RQ1 377 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 OSMRQ99650 979 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 FAM213AQ9BRX8 229 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 HAPLN2Q9GZV7 340 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 RNF208Q9H0X6 261 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 A0A0B4J269 797 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 A0A1W2PQ45 241 aaPredicted RBP22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 A0A1W2PQY0 241 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 ERLIN2O94905 339 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 ADRB2P07550 413 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 GSDMDP57764 484 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 SYCP1Q15431 976 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 RSPH3Q86UC2 560 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 DEFB118Q96PH6 123 aa22.25■■□□□ 1.15
VCPKMT-202ENST00000395860 CNTNAP2Q9UHC6 1331 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 HARSP12081 509 aaKnown RBP22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 VAMP7P51809 220 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 PTPN11Q06124 597 aaPredicted RBP22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 TBX2Q13207 712 aaPredicted RBP22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 PTGISQ16647 500 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 AMHR2Q16671 573 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 ZBTB33Q86T24 672 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 CDHR5Q9HBB8 845 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 TNFSF13BQ9Y275 285 aa22.24■■□□□ 1.15
VCPKMT-202ENST00000395860 ZNF233A6NK53 670 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 TRIM49P0CI25 452 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 TRIM49CP0CI26 452 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 MPZL3Q6UWV2 235 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 SERINC5Q86VE9 423 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 PPFIBP1Q86W92 1011 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 CCDC155Q8N6L0 562 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 STARD7Q9NQZ5 370 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 PHF24Q9UPV7 400 aa22.23■■□□□ 1.15
VCPKMT-202ENST00000395860 M0QZ92 97 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 TULP1O00294 542 aaPredicted RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 RPLP2P05387 115 aaKnown RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 PROZP22891 400 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 ACOT2P49753 483 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 LBX1P52954 281 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 MCL1Q07820 350 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 NOLC1Q14978 699 aaKnown RBP eCLIP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 ZNF568Q3ZCX4 644 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 FBXO46Q6PJ61 603 aaPredicted RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 MFSD14AQ96MC6 490 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 PTPRHQ9HD43 1115 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 DNM1LO00429 736 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 TPM1P09493 284 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 DARSP14868 501 aaKnown RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 FGFR4P22455 802 aa22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 EIF4BP23588 611 aaKnown RBP22.22■■□□□ 1.15
VCPKMT-202ENST00000395860 CRYBB1P53674 252 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms