RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
PTPN20-206ENST00000395722 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
PTPN20-206ENST00000395722 PTPRHQ9HD43 1115 aa16.53■□□□□ 0.24
PTPN20-206ENST00000395722 CNTNAP2Q9UHC6 1331 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 A0A0B4J269 797 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 LGALS16A8MUM7 142 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 ARVCFO00192 962 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 TOM1L1O75674 476 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 SGPL1O95470 568 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 EPB41P11171 864 aaKnown RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 MTIF2P46199 727 aaKnown RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 CDK7P50613 346 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 CRYBB1P53674 252 aaPredicted RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 MRPS6P82932 125 aaKnown RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 TMEM62Q0P6H9 643 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 PTK7Q13308 1070 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 MAN2A1Q16706 1144 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 TRIM71Q2Q1W2 868 aaKnown RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 CCDC40Q4G0X9 1142 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 PCIF1Q9H4Z3 704 aa16.52■□□□□ 0.24
PTPN20-206ENST00000395722 ARMCX3Q9UH62 379 aaPredicted RBP16.52■□□□□ 0.24
PTPN20-206ENST00000395722 EXOC3O60645 756 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
PTPN20-206ENST00000395722 CEP135Q66GS9 1140 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 RSPH3Q86UC2 560 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 FAM186BQ8IYM0 893 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 POMGNT1Q8WZA1 660 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 DHX38Q92620 1227 aaKnown RBP16.51■□□□□ 0.23
PTPN20-206ENST00000395722 ZBTB45Q96K62 511 aaPredicted RBP16.51■□□□□ 0.23
PTPN20-206ENST00000395722 VPS16Q9H269 839 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 TNFSF13BQ9Y275 285 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 B4GALT5O43286 388 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 PBX1P40424 430 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 MCL1Q07820 350 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 MGAT3Q09327 533 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 CCDC173Q0VFZ6 552 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 SNX17Q15036 470 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 FILIP1LQ4L180 1135 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 SCLT1Q96NL6 688 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 OSMRQ99650 979 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 CELF4Q9BZC1 486 aaKnown RBP16.51■□□□□ 0.23
PTPN20-206ENST00000395722 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
PTPN20-206ENST00000395722 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
PTPN20-206ENST00000395722 N4BP3O15049 544 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 TEX33O43247 280 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 TSPAN1O60635 241 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 CSDE1O75534 798 aaKnown RBP16.5■□□□□ 0.23
PTPN20-206ENST00000395722 TPM3P06753 285 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 EIF4BP23588 611 aaKnown RBP16.5■□□□□ 0.23
PTPN20-206ENST00000395722 PPP2R3AQ06190 1150 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 VWA3BQ502W6 1294 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 ATF7IP2Q5U623 682 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 GPD1LQ8N335 351 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 TMEM40Q8WWA1 233 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 NOC4LQ9BVI4 516 aaKnown RBP16.5■□□□□ 0.23
PTPN20-206ENST00000395722 KIAA1586Q9HCI6 787 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 TRPV2Q9Y5S1 764 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 CENPFP49454 3210 aa16.5■□□□□ 0.23
PTPN20-206ENST00000395722 EXTL3O43909 919 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 FAM189A1O60320 539 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 CAND2O75155 1236 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 ADRB2P07550 413 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 PRKCSHP14314 528 aaPredicted RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 DEKP35659 375 aaKnown RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 ENPEPQ07075 957 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 FAM26DQ5JW98 314 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 EEF1DP3Q658K8 133 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 VSTM4Q8IW00 320 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 MFSD14AQ96MC6 490 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 AGO2Q9UKV8 859 aaKnown RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 CDY2AQ9Y6F7 541 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 CLDN3O15551 220 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 GJA8P48165 433 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 SNRNP35Q16560 246 aaKnown RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 INTS8Q75QN2 995 aaKnown RBP16.49■□□□□ 0.23
PTPN20-206ENST00000395722 CBWD2Q8IUF1 395 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 SAAL1Q96ER3 474 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 NDST4Q9H3R1 872 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 PDZD7Q9H5P4 517 aa16.49■□□□□ 0.23
PTPN20-206ENST00000395722 A0A1B0GUA9 196 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 GOLGA8IPA6NC78 632 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 GOLGA8JA6NMD2 632 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 B4GALT4O60513 344 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
PTPN20-206ENST00000395722 CHRNA1P02708 482 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 TPM2P07951 284 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 COL6A1P12109 1028 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 CAPN2P17655 700 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 HOXA11P31270 313 aaPredicted RBP16.48■□□□□ 0.23
PTPN20-206ENST00000395722 RBL2Q08999 1139 aa16.48■□□□□ 0.23
PTPN20-206ENST00000395722 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms