RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 PEX3P56589 373 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 UBE3AQ05086 875 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 CAMK1Q14012 370 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 STK38Q15208 465 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 TIGD5Q53EQ6 642 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 NOMO2Q5JPE7 1267 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 SPECC1Q5M775 1068 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 SLC27A1Q6PCB7 646 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 GLB1LQ6UWU2 654 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 TAS1R3Q7RTX0 852 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 SPRYD3Q8NCJ5 442 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 RNF169Q8NCN4 708 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 SPIRE2Q8WWL2 714 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 RSAD1Q9HA92 442 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 UBN1Q9NPG3 1134 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 TFIP11Q9UBB9 837 aaKnown RBP14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 CCDC39Q9UFE4 941 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 KCNG1Q9UIX4 513 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 ODF2LQ9ULJ1 636 aa14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 RBM19Q9Y4C8 960 aaKnown RBP14.73□□□□□ -0.05
HLA-DMA-202ENST00000395303 ANK1P16157 1881 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 PLS3P13797 630 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 DDIT3P35638 169 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 ZNF131P52739 623 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 PLCB3Q01970 1234 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 DMP1Q13316 513 aaPredicted RBP14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 PRPF4BQ13523 1007 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 MCM6Q14566 821 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 KCNT2Q6UVM3 1135 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 LARP4BQ92615 738 aaKnown RBP14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 HLA-CQ95604 372 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 ZNF558Q96NG5 402 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 KIFC3Q9BVG8 833 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 PDZD7Q9H5P4 517 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 KMT5AQ9NQR1 393 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 TBC1D13Q9NVG8 400 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 LZTS1Q9Y250 596 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 ZDHHC9Q9Y397 364 aa14.72□□□□□ -0.05
HLA-DMA-202ENST00000395303 MTCL1Q9Y4B5 1905 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 CCDC169A6NNP5 214 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 K7ERI5 159 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 FGF18O76093 207 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 SSBP05455 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 ITGA4P13612 1032 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 DNAJB1P25685 340 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 PPM1AP35813 382 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 COL19A1Q14993 1142 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 SPOUT1Q5T280 376 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 NT5DC1Q5TFE4 455 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 FOXD4L5Q5VV16 416 aaPredicted RBP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 GPBP1Q86WP2 473 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 FOXD4L4Q8WXT5 416 aaPredicted RBP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 REEP2Q9BRK0 252 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 NSUN3Q9H649 340 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 NRDE2Q9H7Z3 1164 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 ALG13Q9NP73 1137 aaKnown RBP14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 KANSL3Q9P2N6 904 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 GIT1Q9Y2X7 761 aa14.71□□□□□ -0.05
HLA-DMA-202ENST00000395303 A0A087X0B3 334 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 NPHP3-ACAD11A0A0J9YXS1 232 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 SFI1A8K8P3 1242 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 SLC16A4O15374 487 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 CUTAO60888 179 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 NPTXRO95502 500 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 PLA2G5P39877 138 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 TXLNAP40222 546 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 NCKAP1LP55160 1127 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 GIT2Q14161 759 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 BECN1Q14457 450 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 LONRF3Q496Y0 759 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 AXDND1Q5T1B0 1012 aaPredicted RBP14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 EEF1DP3Q658K8 133 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 CDR2LQ86X02 465 aaPredicted RBP14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 HACE1Q8IYU2 909 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 SLC39A11Q8N1S5 342 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 TMEM161BQ8NDZ6 487 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 RASSF8Q8NHQ8 419 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 URGCPQ8TCY9 931 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 TRIM6Q9C030 488 aaPredicted RBP14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 NXF3Q9H4D5 531 aaKnown RBP14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 EPHX3Q9H6B9 360 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 PTPRHQ9HD43 1115 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 SPG21Q9NZD8 308 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 LARSQ9P2J5 1176 aaKnown RBP14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 RCOR1Q9UKL0 485 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 TNFSF13BQ9Y275 285 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 HES2Q9Y543 173 aa14.7□□□□□ -0.06
HLA-DMA-202ENST00000395303 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 ARL5CA6NH57 179 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 FSCN2O14926 492 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 B4GALT3O60512 393 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 SCP2P22307 547 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 PROZP22891 400 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 SMTNP53814 917 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 BCAR1P56945 870 aa14.69□□□□□ -0.06
HLA-DMA-202ENST00000395303 RAD51AP2Q09MP3 1159 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms