RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 MYL7Q01449 175 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 AMHR2Q16671 573 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 ZACNQ401N2 412 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 SRGAP1Q7Z6B7 1085 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 DDX1Q92499 740 aaKnown RBP15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 RABGGTAQ92696 567 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 NAGPAQ9UK23 515 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 CTAGE9A4FU28 777 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 CLIC2O15247 247 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 ATP8B1O43520 1251 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 GGPS1O95749 300 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 GZMAP12544 262 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 DLG4P78352 724 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 GPR142Q7Z601 462 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 CXorf38Q8TB03 319 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 TMEM59LQ9UK28 342 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 ZNF215Q9UL58 517 aaPredicted RBP15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 SCN10AQ9Y5Y9 1956 aa15.42■□□□□ 0.06
CDC42SE2-202ENST00000395246 TNFRSF8P28908 595 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 ZNF132P52740 706 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 PTK2Q05397 1052 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 ASIC2Q16515 512 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 IFT74Q96LB3 600 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 MBLAC1A4D2B0 266 aaPredicted RBP15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 CCDC172P0C7W6 258 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 FAM102BQ5T8I3 360 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 KRT39Q6A163 491 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 USP37Q86T82 979 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 SLC35F6Q8N357 371 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 SEPT9Q9UHD8 586 aaPredicted RBP15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 SAMM50Q9Y512 469 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 ADORA2AP29274 412 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 GNG11P61952 73 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 LY6KQ17RY6 165 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 ZNF677Q86XU0 584 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 KSR1Q8IVT5 923 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 C2orf69Q8N8R5 385 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 LNX1Q8TBB1 728 aaPredicted RBP15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 ACO2Q99798 780 aaKnown RBP15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 SALL4Q9UJQ4 1053 aa15.41■□□□□ 0.06
CDC42SE2-202ENST00000395246 CCL15-CCL14A0A0B4J2E2 113 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 A6NJR5 290 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 PPFIA4O75335 1185 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 CCL15Q16663 113 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 KYAT1Q16773 422 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 MEI1Q5TIA1 1274 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 WDR93Q6P2C0 686 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 IFIH1Q9BYX4 1025 aaKnown RBP15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 A0A087X0T9 212 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 DDX3XO00571 662 aaKnown RBP eCLIP15.4■□□□□ 0.069e-7■■■■□ 21.7
CDC42SE2-202ENST00000395246 MAGEB2O15479 319 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 GH1P01241 217 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 TMEM253P0C7T8 217 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 FAM228BP0C875 321 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 GPR161Q8N6U8 529 aaKnown RBP15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 ZNF516Q92618 1163 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 UBXN6Q9BZV1 441 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 CPSF3Q9UKF6 684 aaKnown RBP15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 TLL2Q9Y6L7 1015 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 ACTN1P12814 892 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 PTENP60484 403 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 PLS1Q14651 629 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 CGRRF1Q99675 332 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 GJD2Q9UKL4 321 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 SNX12Q9UMY4 172 aa15.4■□□□□ 0.06
CDC42SE2-202ENST00000395246 GRID2IPA4D2P6 1211 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 EXOC3O60645 756 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 MBTD1Q05BQ5 628 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 PRPF4BQ13523 1007 aaKnown RBP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 MARCH8Q5T0T0 291 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 RASGEF1CQ8N431 466 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 SLC7A3Q8WY07 619 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 TAF4BQ92750 862 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 UPF3AQ9H1J1 476 aaKnown RBP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 ABHD16BQ9H3Z7 469 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 ERAP1Q9NZ08 941 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 ZRANB2O95218 330 aaKnown RBP eCLIP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 KRT13P13646 458 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 BRSK2Q8IWQ3 736 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 EIF1ADQ8N9N8 165 aaKnown RBP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 EEF2KMTQ96G04 330 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 IRX2Q9BZI1 471 aaPredicted RBP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 LUC7LQ9NQ29 371 aaKnown RBP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 TNFSF13BQ9Y275 285 aa15.39■□□□□ 0.05
CDC42SE2-202ENST00000395246 B4GALT4O60513 344 aa15.38■□□□□ 0.05
CDC42SE2-202ENST00000395246 ACO1P21399 889 aaKnown RBP15.38■□□□□ 0.05
CDC42SE2-202ENST00000395246 CDC42EP1Q00587 391 aa15.38■□□□□ 0.05
CDC42SE2-202ENST00000395246 KIF5AQ12840 1032 aa15.38■□□□□ 0.05
CDC42SE2-202ENST00000395246 SURF1Q15526 300 aa15.38■□□□□ 0.05
CDC42SE2-202ENST00000395246 PLEKHH3Q7Z736 793 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms