RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 SFR1Q86XK3 245 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 ZC3H3Q8IXZ2 948 aaKnown RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 SMYD4Q8IYR2 804 aaPredicted RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 GLIS3Q8NEA6 775 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 TCP11Q8WWU5 503 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 BSNDQ8WZ55 320 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 TOP1MTQ969P6 601 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 CCDC47Q96A33 483 aaKnown RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 VWCEQ96DN2 955 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 DRC1Q96MC2 740 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 CDX2Q99626 313 aaPredicted RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 DUSP9Q99956 384 aaKnown RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 GCOM2Q9BZD3 368 aaPredicted RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 NKX2-4Q9H2Z4 354 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 ATP6V0A4Q9HBG4 840 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 SLC39A2Q9NP94 309 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 GPRC5CQ9NQ84 441 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 LARSQ9P2J5 1176 aaKnown RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 SUCLA2Q9P2R7 463 aaPredicted RBP9.32□□□□□ -0.92
HERC4-203ENST00000395185 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 RWDD2AQ9UIY3 292 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 PADI3Q9ULW8 664 aa9.32□□□□□ -0.92
HERC4-203ENST00000395185 DENND3A2RUS2 1198 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 LRRC10BA6NIK2 292 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 ASAP2O43150 1006 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 USO1O60763 962 aaKnown RBP9.31□□□□□ -0.92
HERC4-203ENST00000395185 FAM13AO94988 1023 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 GJB5O95377 273 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 VTNP04004 478 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 GLRA2P23416 452 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 EIF4BP23588 611 aaKnown RBP9.31□□□□□ -0.92
HERC4-203ENST00000395185 CCNE1P24864 410 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 CASP5P51878 434 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 POLGP54098 1239 aaPredicted RBP9.31□□□□□ -0.92
HERC4-203ENST00000395185 PMS1P54277 932 aaKnown RBP9.31□□□□□ -0.92
HERC4-203ENST00000395185 NCKAP1LP55160 1127 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 NCBP1Q09161 790 aaKnown RBP9.31□□□□□ -0.92
HERC4-203ENST00000395185 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 EMC2Q15006 297 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 NFIL3Q16649 462 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 SPATA1Q5VX52 437 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 FAM117BQ6P1L5 589 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.31□□□□□ -0.92
HERC4-203ENST00000395185 IRF2BP1Q8IU81 584 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 LRRC71Q8N4P6 559 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 MYCT1Q8N699 235 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 SLC17A8Q8NDX2 589 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 TMEM161BQ8NDZ6 487 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 NLRP7Q8WX94 980 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 ZBTB10Q96DT7 871 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 YME1L1Q96TA2 773 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 C1orf112Q9NSG2 853 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 ARHGAP28Q9P2N2 729 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 ST3GAL5Q9UNP4 418 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 TRAF3IP3Q9Y228 551 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 PCDHB7Q9Y5E2 793 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
HERC4-203ENST00000395185 GOLGA6L3A6NEY3 463 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 SMTNL1A8MU46 457 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 TBCAO75347 108 aaKnown RBP9.3□□□□□ -0.92
HERC4-203ENST00000395185 KRT18P05783 430 aaKnown RBP9.3□□□□□ -0.92
HERC4-203ENST00000395185 CA3P07451 260 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 MYOGP15173 224 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 FOSL2P15408 326 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 IGFBP4P22692 258 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 NMT1P30419 496 aaKnown RBP9.3□□□□□ -0.92
HERC4-203ENST00000395185 CD52P31358 61 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 NPTX2P47972 431 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 MRE11P49959 708 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 CLCN3P51790 818 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 DEFB103AP81534 67 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 DRP2Q13474 957 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 ALCAMQ13740 583 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 GRIN2CQ14957 1233 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 KIZQ2M2Z5 673 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 CDKAL1Q5VV42 579 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 ANKRD40Q6AI12 368 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 LUZP1Q86V48 1076 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 ASAP3Q8TDY4 903 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 NELFBQ8WX92 580 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 PSPC1Q8WXF1 523 aaKnown RBP9.3□□□□□ -0.92
HERC4-203ENST00000395185 P2RX5Q93086 422 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 OSMRQ99650 979 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 AGO3Q9H9G7 860 aaKnown RBP9.3□□□□□ -0.92
HERC4-203ENST00000395185 GRPEL1Q9HAV7 217 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 DMAC2Q9NW81 257 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 YBX2Q9Y2T7 364 aaKnown RBP9.3□□□□□ -0.92
HERC4-203ENST00000395185 FRMPD3Q5JV73 1810 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 SCN10AQ9Y5Y9 1956 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 UBE4BO95155 1302 aa9.3□□□□□ -0.92
HERC4-203ENST00000395185 PDXKO00764 312 aa9.29□□□□□ -0.92
HERC4-203ENST00000395185 PSMA7O14818 248 aa9.29□□□□□ -0.92
HERC4-203ENST00000395185 TGFB1I1O43294 461 aa9.29□□□□□ -0.92
HERC4-203ENST00000395185 AP5Z1O43299 807 aa9.29□□□□□ -0.92
HERC4-203ENST00000395185 GPR32O75388 356 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms