RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 ZNF131P52739 623 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 SP4Q02446 784 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 XKR3Q5GH77 459 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 SMYD4Q8IYR2 804 aaPredicted RBP12.61□□□□□ -0.39
RTN1-203ENST00000395090 COPS5Q92905 334 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 SPATA33Q96N06 139 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 REEP2Q9BRK0 252 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 ARHGAP39Q9C0H5 1083 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 GDAQ9Y2T3 454 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 PCDHGC4Q9Y5F7 938 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 DOCK5Q9H7D0 1870 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 ARHGEF35A5YM69 484 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 BECN2A8MW95 431 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 GH1P01241 217 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 FAM157BP0CG42 384 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 ZNF865P0CJ78 1059 aaPredicted RBP12.6□□□□□ -0.39
RTN1-203ENST00000395090 IDEP14735 1019 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 TCF7P36402 384 aaPredicted RBP12.6□□□□□ -0.39
RTN1-203ENST00000395090 PPP1R2P41236 205 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 STAT5BP51692 787 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 HTRA3P83110 453 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 COASYQ13057 564 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 CCL14Q16627 93 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 CCDC144BQ3MJ40 725 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 FAM160B1Q5W0V3 765 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 PLPPR4Q7Z2D5 763 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 KIAA0895Q8NCT3 520 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 DHTKD1Q96HY7 919 aaPredicted RBP12.6□□□□□ -0.39
RTN1-203ENST00000395090 TIPINQ9BVW5 301 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 PDLIM7Q9NR12 457 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 ODF2LQ9ULJ1 636 aa12.6□□□□□ -0.39
RTN1-203ENST00000395090 TREHO43280 583 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 KRT18P05783 430 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 GAP43P17677 238 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 CAP1Q01518 475 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 MYL5Q02045 173 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 PRKCEQ02156 737 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 UTP14CQ5TAP6 766 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 AOPEPQ8N6M6 819 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 PPTC7Q8NI37 304 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 RWDD2AQ9UIY3 292 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 FNDC3AQ9Y2H6 1198 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 COL4A3BPQ9Y5P4 624 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 WDR81Q562E7 1941 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 LOXHD1Q8IVV2 1947 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 MGAMO43451 1857 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 TMEM150BA6NC51 233 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 GOLGA6L19H0YKK7 550 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 CYP2C19P33261 490 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 FLT3LGP49771 235 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 SLC26A2P50443 739 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 NPEPPSP55786 919 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 TNFAIP2Q03169 654 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 RAD51AP2Q09MP3 1159 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 MAPK7Q13164 816 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 UBAP2LQ14157 1087 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 KIF22Q14807 665 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 TARBP2Q15633 366 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 FAM26FQ5R3K3 315 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 PRAMEF19Q5SWL8 479 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 CENPPQ6IPU0 288 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 FOXR2Q6PJQ5 311 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 GUF1Q8N442 669 aaKnown RBP12.59□□□□□ -0.39
RTN1-203ENST00000395090 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 SMARCAD1Q9H4L7 1026 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 SLC39A2Q9NP94 309 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 CYP26B1Q9NR63 512 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 OLFML3Q9NRN5 406 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 SAGE1Q9NXZ1 904 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 GABRQQ9UN88 632 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 Q9Y3F1 56 aa12.59□□□□□ -0.39
RTN1-203ENST00000395090 RSPH10B2B2RC85 870 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 GPR182O15218 404 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 RSPH10BP0C881 870 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 STIM1Q13586 685 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 COL19A1Q14993 1142 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
RTN1-203ENST00000395090 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 PLA2G4FQ68DD2 849 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 DAW1Q8N136 415 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 ZNF837Q96EG3 531 aaPredicted RBP12.58□□□□□ -0.4
RTN1-203ENST00000395090 CEP170P1Q96L14 293 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 SEL1LQ9UBV2 794 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 ZHX1Q9UKY1 873 aaPredicted RBP12.58□□□□□ -0.4
RTN1-203ENST00000395090 MAPK8IP1Q9UQF2 711 aa12.58□□□□□ -0.4
RTN1-203ENST00000395090 PPME1Q9Y570 386 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms