RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 TEKT3Q9BXF9 490 aa11.13□□□□□ -0.63
HIF1A-203ENST00000394997 PPANQ9NQ55 473 aaKnown RBP11.13□□□□□ -0.63
HIF1A-203ENST00000394997 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
HIF1A-203ENST00000394997 SUCLA2Q9P2R7 463 aaPredicted RBP11.13□□□□□ -0.63
HIF1A-203ENST00000394997 DAAM1Q9Y4D1 1078 aa11.13□□□□□ -0.63
HIF1A-203ENST00000394997 RAD51CO43502 376 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 AKR1B10O60218 316 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 GAS7O60861 476 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 ITGA4P13612 1032 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 RPS12P25398 132 aaKnown RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CCDC142Q17RM4 750 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CCDC40Q4G0X9 1142 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 TNFAIP8L3Q5GJ75 292 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 FAM186BQ8IYM0 893 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 KLRG1Q96E93 195 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 STIM2Q9P246 746 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CHMP2AO43633 222 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 TUBBP07437 444 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 YWHABP31946 246 aaKnown RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 GALCP54803 685 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 BACE1P56817 501 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 NNTQ13423 1086 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CFAP58Q5T655 872 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 NEU2Q9Y3R4 380 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 TCRBV5S1A1TA0A578 114 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 PTGIRP43119 386 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 OAZ1P54368 228 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 ACTN3Q08043 901 aaPredicted RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 DRAP1Q14919 205 aaPredicted RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 TARBP2Q15633 366 aaKnown RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 ASIC2Q16515 512 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 GLE1Q53GS7 698 aaKnown RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 LRRC31Q6UY01 552 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 SHC3Q92529 594 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 ATG4CQ96DT6 458 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 HERPUD2Q9BSE4 406 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CCPG1Q9ULG6 757 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 CNTN6Q9UQ52 1028 aa11.12□□□□□ -0.63
HIF1A-203ENST00000394997 BZW2Q9Y6E2 419 aaKnown RBP11.12□□□□□ -0.63
HIF1A-203ENST00000394997 HGSO14964 777 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 TMEM253P0C7T8 217 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 DSG3P32926 999 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 SOX10P56693 466 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 FMO1Q01740 532 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 CEP85LQ5SZL2 805 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.11□□□□□ -0.637e-9■■■■□ 21.3
HIF1A-203ENST00000394997 NOX5Q96PH1 765 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 SH2D3AQ9BRG2 576 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 MAF1Q9H063 256 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 ACP6Q9NPH0 428 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 SPATA31C2B4DYI2 1134 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 MARCH6O60337 910 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 USO1O60763 962 aaKnown RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 ACO1P21399 889 aaKnown RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 GPC3P51654 580 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 RTP1P59025 263 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 PTP4A2Q12974 167 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 PDCLQ13371 301 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 KIAA0753Q2KHM9 967 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 ANKS1BQ7Z6G8 1248 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 PSPC1Q8WXF1 523 aaKnown RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 RPAP3Q9H6T3 665 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 RNF14Q9UBS8 474 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 E7EVH7 732 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 TACC1O75410 805 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 PIGRP01833 764 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 ICAM3P32942 547 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 PLA2G4FQ68DD2 849 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 ALKBH5Q6P6C2 394 aaKnown RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 ZDHHC24Q6UX98 284 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 CCDC60Q8IWA6 550 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 SCYL3Q8IZE3 742 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 N4BP2L2Q92802 583 aaPredicted RBP11.11□□□□□ -0.63
HIF1A-203ENST00000394997 THAP2Q9H0W7 228 aa11.11□□□□□ -0.63
HIF1A-203ENST00000394997 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
HIF1A-203ENST00000394997 P4HA2O15460 535 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 BUB1BO60566 1050 aaPredicted RBP11.1□□□□□ -0.63
HIF1A-203ENST00000394997 HSPA9P38646 679 aaKnown RBP11.1□□□□□ -0.63
HIF1A-203ENST00000394997 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
HIF1A-203ENST00000394997 GUCY2FP51841 1108 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 IFT88Q13099 833 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 B4GALNT4Q76KP1 1039 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 MYCT1Q8N699 235 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 ZKSCAN4Q969J2 545 aaPredicted RBP11.1□□□□□ -0.63
HIF1A-203ENST00000394997 HSPBP1Q9NZL4 362 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 DNAJC12Q9UKB3 198 aa11.1□□□□□ -0.63
HIF1A-203ENST00000394997 BCS1LQ9Y276 419 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms