RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RTP3Q9BQQ7 232 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 ZSWIM6Q9HCJ5 1215 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 UBN1Q9NPG3 1134 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 SSX2IPQ9Y2D8 614 aa23.58■■□□□ 1.37
TRAF4-203ENST00000394925 CCDC194A0A1B0GVG4 234 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 ERLIN2O94905 339 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 YWHABP31946 246 aaKnown RBP23.57■■□□□ 1.36
TRAF4-203ENST00000394925 EMC2Q15006 297 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 FERMT3Q86UX7 667 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 FAM177A1Q8N128 213 aaPredicted RBP23.57■■□□□ 1.36
TRAF4-203ENST00000394925 TCP11Q8WWU5 503 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 RSAD2Q8WXG1 361 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 GAD1Q99259 594 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 LXNQ9BS40 222 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 EIF2AQ9BY44 585 aaKnown RBP23.57■■□□□ 1.36
TRAF4-203ENST00000394925 RNF39Q9H2S5 420 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 RGL1Q9NZL6 768 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 IPPQ9Y573 584 aa23.57■■□□□ 1.36
TRAF4-203ENST00000394925 ARL5CA6NH57 179 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 STK25O00506 426 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 INPPL1O15357 1258 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 ASAP2O43150 1006 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 MARCH6O60337 910 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 GLUD1P00367 558 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 CFHP08603 1231 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 GLUD2P49448 558 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 EPHA7Q15375 998 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 ANGPT1Q15389 498 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 XKR9Q5GH70 373 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 PPP4R3AQ6IN85 833 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 OTUD6AQ7L8S5 288 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 NEK8Q86SG6 692 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 C4orf19Q8IY42 314 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 ADSSL1Q8N142 457 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 DTWD2Q8NBA8 298 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 WDR6Q9NNW5 1121 aaKnown RBP23.56■■□□□ 1.36
TRAF4-203ENST00000394925 MIOSQ9NXC5 875 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 HES2Q9Y543 173 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 CYP46A1Q9Y6A2 500 aa23.56■■□□□ 1.36
TRAF4-203ENST00000394925 ZBTB39O15060 712 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 GAS2O43903 313 aaKnown RBP23.55■■□□□ 1.36
TRAF4-203ENST00000394925 CCNT1O60563 726 aaKnown RBP23.55■■□□□ 1.36
TRAF4-203ENST00000394925 RFPL2O75678 378 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 SPATA31D3P0C874 917 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 GCFC2P16383 781 aaKnown RBP23.55■■□□□ 1.36
TRAF4-203ENST00000394925 MLH1P40692 756 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 FOXK2Q01167 660 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 KIAA0319Q5VV43 1072 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 NCAPH2Q6IBW4 605 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 ELMSAN1Q6PJG2 1045 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 SPATA31D4Q6ZUB0 917 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 STAMQ92783 540 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 HAS1Q92839 578 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 DYDC2Q96IM9 177 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 CPB2Q96IY4 423 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 MTRQ99707 1265 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 APOL6Q9BWW8 343 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 DPP7Q9UHL4 492 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 CLUHO75153 1309 aa23.55■■□□□ 1.36
TRAF4-203ENST00000394925 TDRD15B5MCY1 1934 aaKnown RBP23.55■■□□□ 1.36
TRAF4-203ENST00000394925 F8W810 466 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 TSPAN1O60635 241 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 SCNN1GP51170 649 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 CYP4A11Q02928 519 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 DSC1Q08554 894 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 CTTNQ14247 550 aaKnown RBP23.54■■□□□ 1.36
TRAF4-203ENST00000394925 NOTUMQ6P988 496 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 CYP26C1Q6V0L0 522 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 RNF168Q8IYW5 571 aaPredicted RBP23.54■■□□□ 1.36
TRAF4-203ENST00000394925 SMG7Q92540 1137 aaKnown RBP23.54■■□□□ 1.36
TRAF4-203ENST00000394925 ZFP42Q96MM3 310 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 MYADMQ96S97 322 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 PHF20Q9BVI0 1012 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 RXFP1Q9HBX9 757 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 DOCK8Q8NF50 2099 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 ARID2Q68CP9 1835 aa23.54■■□□□ 1.36
TRAF4-203ENST00000394925 EP300Q09472 2414 aaPredicted RBP23.53■■□□□ 1.36
TRAF4-203ENST00000394925 ZNF292O60281 2723 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 KRBA1A5PL33 1030 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 EFEMP2O95967 443 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 AXLP30530 894 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 PTENP60484 403 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 DSG1Q02413 1049 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 NCBP1Q09161 790 aaKnown RBP23.53■■□□□ 1.36
TRAF4-203ENST00000394925 PALB2Q86YC2 1186 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 POTEDQ86YR6 584 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 ZSWIM4Q9H7M6 989 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 WNT16Q9UBV4 365 aa23.53■■□□□ 1.36
TRAF4-203ENST00000394925 MTCL1Q9Y4B5 1905 aaKnown RBP23.53■■□□□ 1.36
TRAF4-203ENST00000394925 INO80B-WBP1J3KQ70 363 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 TBX3O15119 743 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 NR1I2O75469 434 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 RFX1P22670 979 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 MXD4Q14582 209 aaPredicted RBP23.52■■□□□ 1.36
TRAF4-203ENST00000394925 PIK3AP1Q6ZUJ8 805 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 TPH2Q8IWU9 490 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 SLC44A3Q8N4M1 653 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 CCDC51Q96ER9 411 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 B3GALT6Q96L58 329 aa23.52■■□□□ 1.36
TRAF4-203ENST00000394925 COLEC11Q9BWP8 271 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms