RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 SLC30A5Q8TAD4 765 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 SYT11Q9BT88 431 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 R3HDMLQ9H3Y0 253 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 TMEM8AQ9HCN3 771 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 COQ4Q9Y3A0 265 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 ZNFX1Q9P2E3 1918 aaKnown RBP21.75■■□□□ 1.07
PTPN11-202ENST00000392597 DDX3XO00571 662 aaKnown RBP eCLIP21.75■■□□□ 1.074e-15■■■■■ 27.5
PTPN11-202ENST00000392597 SRGAP2O75044 1071 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 PIGRP01833 764 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 PGK2P07205 417 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 TCF7P36402 384 aaPredicted RBP21.75■■□□□ 1.07
PTPN11-202ENST00000392597 NAP1L1P55209 391 aaKnown RBP21.75■■□□□ 1.07
PTPN11-202ENST00000392597 ITIH3Q06033 890 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 CYP24A1Q07973 514 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 STRN3Q13033 797 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 BRD3Q15059 726 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 SAAL1Q96ER3 474 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 PACSIN1Q9BY11 444 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 ANKZF1Q9H8Y5 726 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 ZNF446Q9NWS9 450 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 RAB21Q9UL25 225 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 SLC45A1Q9Y2W3 748 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 STYXL1Q9Y6J8 313 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 A0A0A6YYK5 440 aaPredicted RBP21.75■■□□□ 1.07
PTPN11-202ENST00000392597 LGR5O75473 907 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 SLC10A3P09131 477 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 GLRA2P23416 452 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 KRT39Q6A163 491 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 CCDC102AQ96A19 550 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 BICD1Q96G01 975 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 MMS19Q96T76 1030 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 AZI2Q9H6S1 392 aa21.75■■□□□ 1.07
PTPN11-202ENST00000392597 CCDC151A5D8V7 595 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 BUB1O43683 1085 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 H2AFZP0C0S5 128 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 PNMA6AP0CW24 399 aaPredicted RBP21.74■■□□□ 1.07
PTPN11-202ENST00000392597 LY6KQ17RY6 165 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 CELF3Q5SZQ8 465 aaKnown RBP21.74■■□□□ 1.07
PTPN11-202ENST00000392597 H2AFVQ71UI9 128 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 EXOC8Q8IYI6 725 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 OLIG1Q8TAK6 271 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 ASAP3Q8TDY4 903 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 TMEM143Q96AN5 459 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 OSBPL9Q96SU4 736 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 TLR10Q9BXR5 811 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 EPC1Q9H2F5 836 aa21.74■■□□□ 1.07
PTPN11-202ENST00000392597 UBE2TQ9NPD8 197 aaPredicted RBP21.74■■□□□ 1.07
PTPN11-202ENST00000392597 LRRIQ3A6PVS8 624 aaPredicted RBP21.73■■□□□ 1.07
PTPN11-202ENST00000392597 ATP8B1O43520 1251 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 ZRANB2O95218 330 aaKnown RBP eCLIP21.73■■□□□ 1.07
PTPN11-202ENST00000392597 LIG4P49917 911 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 EEPD1Q7L9B9 569 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 CREG2Q8IUH2 290 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 DEPTORQ8TB45 409 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 CAGE1Q8TC20 777 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 GPR20Q99678 358 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 OGFRQ9NZT2 677 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 ASB14A6NK59 587 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 GAS2O43903 313 aaKnown RBP21.73■■□□□ 1.07
PTPN11-202ENST00000392597 EXTL3O43909 919 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 MAFO75444 373 aaPredicted RBP21.73■■□□□ 1.07
PTPN11-202ENST00000392597 PALMO75781 387 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 ARIH2O95376 493 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 GPC3P51654 580 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 GTF2A2P52657 109 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 CCNA1P78396 465 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 ARHGAP44Q17R89 818 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 PLPPR4Q7Z2D5 763 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 NOA1Q8NC60 698 aaKnown RBP21.73■■□□□ 1.07
PTPN11-202ENST00000392597 BBXQ8WY36 941 aaPredicted RBP21.73■■□□□ 1.07
PTPN11-202ENST00000392597 CAPZA3Q96KX2 299 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 TMEM134Q9H6X4 195 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 RNF14Q9UBS8 474 aa21.73■■□□□ 1.07
PTPN11-202ENST00000392597 ZNF233A6NK53 670 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 FOXN3O00409 490 aaPredicted RBP21.72■■□□□ 1.07
PTPN11-202ENST00000392597 CETPP11597 493 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 SLFN12LQ6IEE8 588 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 CCDC62Q6P9F0 684 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 ARHGEF19Q8IW93 802 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 LNX1Q8TBB1 728 aaPredicted RBP21.72■■□□□ 1.07
PTPN11-202ENST00000392597 HNRNPLLQ8WVV9 542 aaKnown RBP21.72■■□□□ 1.07
PTPN11-202ENST00000392597 CCDC127Q96BQ5 260 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 MS4A4AQ96JQ5 239 aa21.72■■□□□ 1.07
PTPN11-202ENST00000392597 FAM155AB1AL88 458 aaPredicted RBP21.71■■□□□ 1.07
PTPN11-202ENST00000392597 ZNF185O15231 689 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 SLC26A2P50443 739 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 C1QTNF8P60827 252 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 MAP2K1Q02750 393 aaPredicted RBP21.71■■□□□ 1.07
PTPN11-202ENST00000392597 DEFB115Q30KQ5 88 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 CC2D1AQ6P1N0 951 aaPredicted RBP21.71■■□□□ 1.07
PTPN11-202ENST00000392597 FBXL13Q8NEE6 735 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 GPRC5AQ8NFJ5 357 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 U2AF1L4Q8WU68 220 aaKnown RBP21.71■■□□□ 1.07
PTPN11-202ENST00000392597 ARFGAP3Q9NP61 516 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 MCM3APO60318 1980 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 GRID2IPA4D2P6 1211 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 LRRIQ4A6NIV6 560 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 K7ERI5 159 aa21.71■■□□□ 1.07
PTPN11-202ENST00000392597 NOP56O00567 594 aaKnown RBP21.71■■□□□ 1.07
PTPN11-202ENST00000392597 CLDN10P78369 228 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms