RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RCCD1A6NED2 376 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 ANXA13P27216 316 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 ADCYAP1R1P41586 468 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 STAT1P42224 750 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 GCLMP48507 274 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 EFNA5P52803 228 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 TAF1CQ15572 869 aaPredicted RBP23.19■■□□□ 1.3
SPHK1-202ENST00000392496 CYP4F22Q6NT55 531 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 GJB7Q6PEY0 223 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 NPLOC4Q8TAT6 608 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 PSPC1Q8WXF1 523 aaKnown RBP23.19■■□□□ 1.3
SPHK1-202ENST00000392496 LACRTQ9GZZ8 138 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 TRIM10Q9UDY6 481 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 DNAJC12Q9UKB3 198 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 PJA2O43164 708 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 EXTL3O43909 919 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 LGALS2P05162 132 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 FERP16591 822 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 GTF2H1P32780 548 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 MAGEA1P43355 309 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 MXI1P50539 228 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 CYP24A1Q07973 514 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 MKRN4PQ13434 485 aaPredicted RBP23.19■■□□□ 1.3
SPHK1-202ENST00000392496 DRP2Q13474 957 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 GJC2Q5T442 439 aaPredicted RBP23.19■■□□□ 1.3
SPHK1-202ENST00000392496 GPIHBP1Q8IV16 184 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 VTI1AQ96AJ9 217 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 TMEM117Q9H0C3 514 aa23.19■■□□□ 1.3
SPHK1-202ENST00000392496 LUC7LQ9NQ29 371 aaKnown RBP23.19■■□□□ 1.3
SPHK1-202ENST00000392496 ARID5AQ03989 594 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 GFPT1Q06210 699 aaPredicted RBP23.18■■□□□ 1.3
SPHK1-202ENST00000392496 ACVR2BQ13705 512 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 SLC18A3Q16572 532 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 ZNF484Q5JVG2 852 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 MORN1Q5T089 497 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 CDCA2Q69YH5 1023 aaPredicted RBP23.18■■□□□ 1.3
SPHK1-202ENST00000392496 ERO1AQ96HE7 468 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 SUGCTQ9HAC7 445 aa23.18■■□□□ 1.3
SPHK1-202ENST00000392496 CTAGE9A4FU28 777 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 ZNF233A6NK53 670 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 LRRIQ3A6PVS8 624 aaPredicted RBP23.17■■□□□ 1.3
SPHK1-202ENST00000392496 LAMTOR4Q0VGL1 99 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 IRF5Q13568 498 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 TUBB2AQ13885 445 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 DUSP28Q4G0W2 176 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 IQSEC1Q6DN90 963 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 AFG1LQ8WV93 481 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 NAPGQ99747 312 aaPredicted RBP23.17■■□□□ 1.3
SPHK1-202ENST00000392496 TUBB2BQ9BVA1 445 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 TMEM8AQ9HCN3 771 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 ZNF215Q9UL58 517 aaPredicted RBP23.17■■□□□ 1.3
SPHK1-202ENST00000392496 TFR2Q9UP52 801 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 F8VZ95 297 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 LDHAP00338 332 aaKnown RBP23.17■■□□□ 1.3
SPHK1-202ENST00000392496 SOX5P35711 763 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 KRT39Q6A163 491 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 FAM213AQ9BRX8 229 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 C2orf40Q9H1Z8 148 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 AGO2Q9UKV8 859 aaKnown RBP23.17■■□□□ 1.3
SPHK1-202ENST00000392496 COQ4Q9Y3A0 265 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 MRFAP1Q9Y605 127 aa23.17■■□□□ 1.3
SPHK1-202ENST00000392496 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.16■■□□□ 1.3
SPHK1-202ENST00000392496 PPFIA4O75335 1185 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 PTK2Q05397 1052 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 MAP2K5Q13163 448 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 DRAP1Q14919 205 aaPredicted RBP23.16■■□□□ 1.3
SPHK1-202ENST00000392496 PHLDB3Q6NSJ2 640 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 C17orf99Q6UX52 265 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 ZPBP2Q6X784 338 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 IFNL1Q8IU54 200 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 ZBTB8OSQ8IWT0 167 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 LRRC71Q8N4P6 559 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 CCDC127Q96BQ5 260 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 TARS2Q9BW92 718 aaKnown RBP23.16■■□□□ 1.3
SPHK1-202ENST00000392496 CCDC113Q9H0I3 377 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 RNPEPQ9H4A4 650 aa23.16■■□□□ 1.3
SPHK1-202ENST00000392496 SUCLA2Q9P2R7 463 aaPredicted RBP23.16■■□□□ 1.3
SPHK1-202ENST00000392496 COL1A2P08123 1366 aa23.15■■□□□ 1.3
SPHK1-202ENST00000392496 FAM155AB1AL88 458 aaPredicted RBP23.15■■□□□ 1.3
SPHK1-202ENST00000392496 CCDC172P0C7W6 258 aa23.15■■□□□ 1.3
SPHK1-202ENST00000392496 HOXD8P13378 290 aaPredicted RBP23.15■■□□□ 1.3
SPHK1-202ENST00000392496 SMPD1P17405 629 aa23.15■■□□□ 1.3
SPHK1-202ENST00000392496 MAP2K2P36507 400 aa23.15■■□□□ 1.3
SPHK1-202ENST00000392496 C10orf76Q5T2E6 689 aa23.15■■□□□ 1.3
SPHK1-202ENST00000392496 ZNF571Q7Z3V5 609 aaPredicted RBP23.15■■□□□ 1.3
SPHK1-202ENST00000392496 ASAP2O43150 1006 aa23.14■■□□□ 1.3
SPHK1-202ENST00000392496 TFDP1Q14186 410 aa23.14■■□□□ 1.3
SPHK1-202ENST00000392496 TRAPPC12Q8WVT3 735 aa23.14■■□□□ 1.3
SPHK1-202ENST00000392496 SECISBP2LQ93073 1101 aaKnown RBP23.14■■□□□ 1.3
SPHK1-202ENST00000392496 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.14■■□□□ 1.3
SPHK1-202ENST00000392496 GPR88Q9GZN0 384 aa23.14■■□□□ 1.3
SPHK1-202ENST00000392496 ZHX1Q9UKY1 873 aaPredicted RBP23.14■■□□□ 1.3
SPHK1-202ENST00000392496 A0A087X0T9 212 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 A0A0B4J269 797 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 GFPT2O94808 682 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 C22orf31O95567 290 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 HOXC6P09630 235 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 FAM228BP0C875 321 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 INSRRP14616 1297 aa23.14■■□□□ 1.29
SPHK1-202ENST00000392496 PSMD6Q15008 389 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms