RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 DAW1Q8N136 415 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 KRI1Q8N9T8 703 aaKnown RBP13.97□□□□□ -0.17
GGPS1-203ENST00000391855 SPIRE2Q8WWL2 714 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 EIF2AQ9BY44 585 aaKnown RBP13.97□□□□□ -0.17
GGPS1-203ENST00000391855 PRDM6Q9NQX0 595 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 TLR9Q9NR96 1032 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 LARSQ9P2J5 1176 aaKnown RBP13.97□□□□□ -0.17
GGPS1-203ENST00000391855 ARHGAP28Q9P2N2 729 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 STK39Q9UEW8 545 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 INPP5FQ9Y2H2 1132 aa13.97□□□□□ -0.17
GGPS1-203ENST00000391855 K7ERI5 159 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 NPTXRO95502 500 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 YEATS4O95619 227 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 F13A1P00488 732 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 PLS3P13797 630 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 PEX3P56589 373 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 CEBPZQ03701 1054 aaKnown RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 GRIN1Q05586 938 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 CAMK1Q14012 370 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 COL19A1Q14993 1142 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 KARSQ15046 597 aaKnown RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 ATL3Q6DD88 541 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 LARP4BQ92615 738 aaKnown RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 RAD54LQ92698 747 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 PABPC5Q96DU9 382 aaKnown RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 TMEM169Q96HH4 297 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 FAM193BQ96PV7 902 aaPredicted RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 ASB2Q96Q27 587 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 PLIN2Q99541 437 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 TMEM175Q9BSA9 504 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 NTPCRQ9BSD7 190 aaKnown RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.18
GGPS1-203ENST00000391855 KMT5AQ9NQR1 393 aa13.96□□□□□ -0.18
GGPS1-203ENST00000391855 COL6A3P12111 3177 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 TRANK1O15050 2925 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 MEIS3P2A8K0S8 358 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 ZC3H11AO75152 810 aaKnown RBP eCLIP13.95□□□□□ -0.18
GGPS1-203ENST00000391855 PPP6R2O75170 966 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 ABCD1P33897 745 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 BCAR1P56945 870 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 CCDC73Q6ZRK6 1079 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 GPBP1Q86WP2 473 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 LINC00301Q8NCQ3 95 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 KCNN1Q92952 543 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 KIFC3Q9BVG8 833 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 MRPL4Q9BYD3 311 aaKnown RBP13.95□□□□□ -0.18
GGPS1-203ENST00000391855 NXF3Q9H4D5 531 aaKnown RBP13.95□□□□□ -0.18
GGPS1-203ENST00000391855 PDZD7Q9H5P4 517 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 NRDE2Q9H7Z3 1164 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 NGRNQ9NPE2 291 aaKnown RBP13.95□□□□□ -0.18
GGPS1-203ENST00000391855 BLOC1S4Q9NUP1 217 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 PLXNA4Q9HCM2 1894 aa13.95□□□□□ -0.18
GGPS1-203ENST00000391855 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-203ENST00000391855 SPTLC2O15270 562 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 KRT18P05783 430 aaKnown RBP13.94□□□□□ -0.18
GGPS1-203ENST00000391855 LIG1P18858 919 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 MLH1P40692 756 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 BECN1Q14457 450 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 LONRF3Q496Y0 759 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 CDCA3Q99618 268 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-203ENST00000391855 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
GGPS1-203ENST00000391855 ARL5CA6NH57 179 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 FSCN2O14926 492 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
GGPS1-203ENST00000391855 NR1I2O75469 434 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 FAM13AO94988 1023 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 GALTP07902 379 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 DNAJB1P25685 340 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 DDIT3P35638 169 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 ZNF131P52739 623 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 GRIK3Q13003 919 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 STRN3Q13033 797 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 PUS10Q3MIT2 529 aaKnown RBP13.93□□□□□ -0.18
GGPS1-203ENST00000391855 RRAGBQ5VZM2 374 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 CDR2LQ86X02 465 aaPredicted RBP13.93□□□□□ -0.18
GGPS1-203ENST00000391855 KCNG4Q8TDN1 519 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 EPSTI1Q96J88 318 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 CLIC6Q96NY7 704 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 GAD1Q99259 594 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 REEP2Q9BRK0 252 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 APOL6Q9BWW8 343 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 PARVGQ9HBI0 331 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 POLD4Q9HCU8 107 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 ENTPD7Q9NQZ7 604 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 HES2Q9Y543 173 aa13.93□□□□□ -0.18
GGPS1-203ENST00000391855 ALDH2P05091 517 aa13.92□□□□□ -0.18
GGPS1-203ENST00000391855 IRS1P35568 1242 aa13.92□□□□□ -0.18
GGPS1-203ENST00000391855 SLC11A1P49279 550 aa13.92□□□□□ -0.18
GGPS1-203ENST00000391855 NCKAP1LP55160 1127 aa13.92□□□□□ -0.18
GGPS1-203ENST00000391855 DSC1Q08554 894 aa13.92□□□□□ -0.18
GGPS1-203ENST00000391855 RAD51AP2Q09MP3 1159 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms