RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TMC2Q8TDI7 906 aa19.72■□□□□ 0.75
ACTN4-202ENST00000390009 U2AF1L4Q8WU68 220 aaKnown RBP19.72■□□□□ 0.75
ACTN4-202ENST00000390009 SLC10A4Q96EP9 437 aa19.72■□□□□ 0.75
ACTN4-202ENST00000390009 PSMB7Q99436 277 aa19.72■□□□□ 0.75
ACTN4-202ENST00000390009 MROH8Q9H579 483 aa19.72■□□□□ 0.75
ACTN4-202ENST00000390009 H2AFZP0C0S5 128 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 RFC5P40937 340 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 CYP24A1Q07973 514 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 STRN3Q13033 797 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 KIF22Q14807 665 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 BRD3Q15059 726 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 KRT39Q6A163 491 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 KCNV1Q6PIU1 500 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 H2AFVQ71UI9 128 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 PNMA8AQ86V59 439 aaPredicted RBP19.71■□□□□ 0.75
ACTN4-202ENST00000390009 KCNN1Q92952 543 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 VTI1AQ96AJ9 217 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 POP1Q99575 1024 aaKnown RBP19.71■□□□□ 0.75
ACTN4-202ENST00000390009 TMEM8AQ9HCN3 771 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 USP20Q9Y2K6 914 aa19.71■□□□□ 0.75
ACTN4-202ENST00000390009 GRID2IPA4D2P6 1211 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 CXCR5P32302 372 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 LIG4P49917 911 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 GPR162Q16538 588 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 USP37Q86T82 979 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 ARFGAP3Q9NP61 516 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 INTUQ9ULD6 942 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 LRRIQ4A6NIV6 560 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 FTCDO95954 541 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 CYP2C8P10632 490 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 CBX1P83916 185 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 DEPTORQ8TB45 409 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 FAM213AQ9BRX8 229 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 AZI2Q9H6S1 392 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 TOPORSQ9NS56 1045 aaPredicted RBP19.7■□□□□ 0.74
ACTN4-202ENST00000390009 COQ4Q9Y3A0 265 aa19.7■□□□□ 0.74
ACTN4-202ENST00000390009 SCP2P22307 547 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 IFI16Q16666 785 aaKnown RBP19.69■□□□□ 0.74
ACTN4-202ENST00000390009 HSDL1Q3SXM5 330 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 CELF3Q5SZQ8 465 aaKnown RBP19.69■□□□□ 0.74
ACTN4-202ENST00000390009 MEI1Q5TIA1 1274 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 FBXO16Q8IX29 292 aaPredicted RBP19.69■□□□□ 0.74
ACTN4-202ENST00000390009 SEMA4DQ92854 862 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 GPR20Q99678 358 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 ZNF408Q9H9D4 720 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 PNMA3Q9UL41 463 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 PLXNA1Q9UIW2 1896 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 GTF2H1P32780 548 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 ZNF572Q7Z3I7 529 aaPredicted RBP19.69■□□□□ 0.74
ACTN4-202ENST00000390009 SHCBP1Q8NEM2 672 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 FAM167AQ96KS9 214 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 FAM53CQ9NYF3 392 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
ACTN4-202ENST00000390009 K7ERI5 159 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 NOP56O00567 594 aaKnown RBP19.68■□□□□ 0.74
ACTN4-202ENST00000390009 POTEJP0CG39 1038 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 DLATP10515 647 aaKnown RBP19.68■□□□□ 0.74
ACTN4-202ENST00000390009 NOP2P46087 812 aaKnown RBP19.68■□□□□ 0.74
ACTN4-202ENST00000390009 GPC3P51654 580 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 ENPEPQ07075 957 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 MORC4Q8TE76 937 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 GLG1Q92896 1179 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 KAT5Q92993 513 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 EFCC1Q9HA90 598 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.68■□□□□ 0.745e-7■■■■■ 103.4
ACTN4-202ENST00000390009 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
ACTN4-202ENST00000390009 STYXL1Q9Y6J8 313 aa19.68■□□□□ 0.74
ACTN4-202ENST00000390009 A0A0A6YYK5 440 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 ZNF233A6NK53 670 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 EXTL3O43909 919 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 MAFO75444 373 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 TUBBP07437 444 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 TNFAIP3P21580 790 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 GALCP54803 685 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 VSNL1P62760 191 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 C2orf54Q08AI8 447 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 CCDC181Q5TID7 509 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 PPM1KQ8N3J5 372 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 FBXL13Q8NEE6 735 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 TAS1R2Q8TE23 839 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 HNRNPLLQ8WVV9 542 aaKnown RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 KIAA1586Q9HCI6 787 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 PLXNB2O15031 1838 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 TMCO5BA8MYB1 307 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 LGR5O75473 907 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 PIGRP01833 764 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 MARK3P27448 753 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 ITIH3Q06033 890 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 MAP1SQ66K74 1059 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 CCDC62Q6P9F0 684 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 SV2AQ7L0J3 742 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 TRIM50Q86XT4 487 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 BBXQ8WY36 941 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 KREMEN1Q96MU8 473 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 AGPAT1Q99943 283 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 PRDM10Q9NQV6 1147 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 SEPT11Q9NVA2 429 aaKnown RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 RAB20Q9NX57 234 aa19.67■□□□□ 0.74
ACTN4-202ENST00000390009 PACSIN2Q9UNF0 486 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-202ENST00000390009 ATP8B1O43520 1251 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms